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Scaffold Hunter is a JAVA-based software tool for the analysis of structure-related biochemical data. It enables generation of and navigation in a scaffold tree hierarchy annotated with various data.
The project develops new new techniques and algorithms for quickly partitioning and visualizing very large hierarchical structures within a variety of arbitrary shapes and space using Divide and Conquer approach for Treemaps.
Related publications:
https://www.sciencedirect.com/science/article/pii/S1045926X1500066X
https://dl.acm.org/doi/pdf/10.1145/2493102.2493112
A collection of ACO algorithms for the data mining classification task
MYRA is a collection of Ant Colony Optimization (ACO) algorithms for the data mining classification task. It includes popular rule induction and decision tree induction algorithms. The algorithms are ready to be used from the command line or can be easily called from your own Java code. They are build using a modular architecture, so they can be easily extended to incorporate different procedures and/or use different parameter values.
This project is now hosted at: https://github.com/febo/myra
JBoost is a simple, robust system for classification. JBoost contains implementations of several boosting algorithms in an alternating decision tree framework. In addition, JBoost provides extensible software for adding more learning algorithms.
Atera all-in-one platform IT management software with AI agents
Ideal for internal IT departments or managed service providers (MSPs)
Atera’s AI agents don’t just assist, they act. From detection to resolution, they handle incidents and requests instantly, taking your IT management from automated to autonomous.
A Java-based tool for creating, designing and distributing graphical trees that represent syntactic construction of sentences. Useful for drawing trees under X-bar generative theory or any other correlated application.
The EURP OntoLookup is a CREOLE plugin for GATE http://www.gate.ac.uk/ which uses an OWL ontology for lookup. It has a very fast implementation based on a tree of hash maps.
Secure and customizable compute service that lets you create and run virtual machines.
Computing infrastructure in predefined or custom machine sizes to accelerate your cloud transformation. General purpose (E2, N1, N2, N2D) machines provide a good balance of price and performance. Compute optimized (C2) machines offer high-end vCPU performance for compute-intensive workloads. Memory optimized (M2) machines offer the highest memory and are great for in-memory databases. Accelerator optimized (A2) machines are based on the A100 GPU, for very demanding applications.
oBrowse is a web based ontology browser developed in java. oBrowse parses OWL files of an ontology and displays ontology in a tree view. Protege-API, JSF are used in development.
The Cornell Tree-Ring Analysis System. A program for several aspects of dendrochronology: measuring, indexing, crossdating, graphing, summing masters, and even drawing maps of locations of sites.
Framework for storing and editing Forestry-related XML data, with a specialised graphical interface for each object type. Plug-in API for adding functionality. Coded in Java, uses WebStart for distribution, swing GUI, ~100k lines of code.
ZATreeX is a data manager with two control panels. The difference with conventional data managers is its ability to manage any tree structured data:you just have to implment a java interface. It is also able to extend it functionality (another interface)
A ContextTree is a way of dynamically forming relationships between information: the same information can be viewed in different ways, depending on what you want from it.