Open Source Java Information Analysis Software - Page 28

jmathplot is a light java library designed to allow easy plotting of 2D and 3D datas in a java panel.

Converts scanned MRT JPEG pictures in DICOM files. Considers the scaling of the picture and so forth.

The JTimeSeries has moved to github Please go to https://github.com/JTimeSeries/jtimeseries The SourceForge copy has not been maintained since Sep 2012 A java library to assist with capturing and storing timeseries data/metrics. Provides facilities to publish timeseries data across a network, a lightweight server to persist series data, and client user interface components for real time visualization

Application of neural network to predict the future of stock exchange, aerospace ( ufo trajectory ), sound, image, noise, scientific or medical data. You need , by example, 100 days of a numeric data and the number of days to predict (by example 7 days).

Lucene Domain Index is full integration of Lucene project running inside the Oracle database using Oracle JVM. The integration provides a transparent detection of row data changes and an SQL layer for doing search.

Development of a multi platform application designed to allow the web access flow of any kind of data but keep the things simple, customizable and secure.

This software make stats about countries in Hattrick (http://hattrick.org). About all the leagues and generate the results in a excel file. Its very easy to use, and written in Java.

MEASJ, the Multiply Extensible Architecture Simulator in Java, is a Framework for creating Simulations and Emulations of von Neumann architecture based systems.

Software package for building, training and scoring hidden Markov models (HMMs).

A numerical library designed for n-dimensional image-processing written in Java.

analysis of a web based social network (initiated by study project)

oBrowse is a web based ontology browser developed in java. oBrowse parses OWL files of an ontology and displays ontology in a tree view. Protege-API, JSF are used in development.

OASIS is an application that enables complex analytical queries across somatic mutations; copy number changes (CNV); and gene expression data. OASIS has been built on top of the BIoMart frameworks and has been extended to incorporate unique tools and visualizations to facilitate analysis of complex cancer "Omics" datasets.

Ontea - Pattern based Semantic Annotation Platform. Ontea search or create semantic meta data from text or documents using pattern based approaches. Implementation currently includes regular expressions (regex) patterns

A general OWL reasoning framework for the analysis of big biomedical data and implement a MapReduce-based property chain reasoning prototype system. OWL reasoning method is ideally suitable for problems involved complex semantic associations because it is able to infer logical consequences based on a set of asserted rules or axioms. MapReduce framework isused to solve the problem of scalability. In our experiment, we focus on the discovery of associations between Traditional Chinese Medicine (TCM) and Western Medicine (WM).

Starting from GIMMS values as ascii data (each line will be treated as individual time series), the application can smooth the ts - values by applying different algorithm that are based on Fouriertransformation. Separation of seasonal figure as well as the detection of linear trends is possible. Possible breaks in longterm mean can be detected with a change-point analysis using CuSum algorithms. Phenological events such as start-of-season, day-of-max/day-of-min, end-of-season can be determined via threshold-based algorithms or via analysis of max. increase of NDVI during green-up. These analyses work also for multimodal phenologies where individual seasons (partly) interfere each other. User can navigate through all steps of analysis via GUI or can define complex workflows that will be processed in batch-mode.

prOOst is a provenance storing system, which allows users to store their provenance information in OPM notation. It is based on a graph database and can be accessed for querying and adding of information through a REST interface.

this project process images with answer card as subject and extract card information like choices, identification number, etc.

Tools for mass spectrometry, especially for protein mass spectrometry and proteomics: Quantification tools, converters for Applied Biosystems (Q Star and Q Trap), calculation of in-silico fragmentation spectra, converter for Mascot result files

A lightweight datamining engine implement JSR73(java datamining 1.0)

The first and only open source RFID software suite.

S.o.n.a.r. is an analysis- and visualization tool developed for the popular business network XING (www.xing.com). Registered XING users can search for companies and contact their personnel manager or other decision makers, i.e. for a job application.

Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated into Scipion and contains the algorithms in the core libraries and command line programs.

This project aims to be a easy-to-use toolkit of algorithms and utilities for semantic data mining. So far all algorithms are implemented as web services and we provide widgets for their use in the Orange4WS data mining platform.

Java JNI API for morphological analysis of Russian. Note: C++ JNI code and the core code is at the project http://sourceforge.net/projects/seman/ .