Search Results for "graphs"

FastQC is a quality control analysis tool designed to spot potential problems in high throughput sequencing datasets. Its goal is to provide a simple way by which to check the quality of raw sequence data coming from high throughput sequencing pipelines. It does this by running a modular set of analyses on one or more raw sequence files in fastq or bam format. It then produces a report summarizing the results, and highlighting any areas where the library may appear unusual. This should then...

...The latest version is powered by high-precision mode which makes calculation the overlaps much more accurate. Polar coordinate system max angle is now adjustable. The plugin builds any number of math graphs, locates its intersections and extremes, makes the report. The plugin is based on DBGP Plugin for Notepad++ by Damjan Zobo Cvetko

This is a method for identifying graphs using MD5 hashing. It can be used for graph equality comparisons and to facilitate graph isomorphism testing. The graphs can be labeled or unlabeled.

...The data is held in spreadsheets which are referred to as tables with column-based data (typically X and Y values for 2D plots) or matrices (for 3D plots). The spreadsheets as well as graphs and note windows are gathered in a project and can be organized using folders. The built-in analysis operations include column/row statistics, (de)convolution, FFT and FFT-based filters. Scripting Console support in-place evaluation of mathematical expressions and scrtipting interface to ECMAScript like dynamic scripting language(java script). ...

This project develops web-based interactive visualisation to support the analysis and monitoring the data from the comprehensive system dynamics and agent based simulation. This work visualise the data via classical charts and graphs in an interactive way. The web-based platform enables upload csv files, mapping and display the attributes based on user’s preference

math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net

This is a framework used to decompose hierarchical graphs, i.e.,graphs which were created from or contain a hierarchy of modules. Each module is reused several times in the hierarchy. This may be useful to reverse-engineer human constructs like electronic equipment, manufactured machines, or bureaucratic hierarchies; but also to decompose natural constructs like gene-relation or protein-relation nets.

...Its purpose is for creating NLP tools like phrase chunkers, named entity finders, pronoun co-reference solvers etc. A grammar is represented by a state machine which can be visualized, edited and applied. A grammar is organized in graphs of nodes. Nodes are used for consuming words from the input, for executing jumps to other graphs in the grammar or for creating annotations etc. GGS has a unique feature: It allows the user to write JavaScript code to be executed for nodes of the grammar. This is useful for checking grammatical agreements but not only. The user can: declare variables (including complex js structures), check for boolean conditions, use variables in annotations etc.

A 'Defect' Tracking System. This aims at providing a user friendly interface for users to track the 'defects' encountered while developing a software. Created using PHP, JGraph, JavaScript and MySQL RDBMS on Linux Platform with Apache.

MuLaViTo is a multi-layer visualization framework which allows to visualize relations between multiple graphs in derived applications. Moreover, it provides helpful means like k-shortest path algorithms, running algorithms in a separate thread, ...

Crispy Plotter is a function graph plotter for mathematical functions, featuring high drawing speed and an intuitive interface that is fun to use.

PerfParse. Storage and analysis of binary performance data produced by Nagios. High quality accurate graphs of live data from standard Nagios plugins. Permanent history of plugin results with advanced analysis tools.

VisualSense was developed to serve as an analysis tool for textual and numerical data extracted from image analysis of artwork from different cultures and influences. It can be used for any kind of data respecting the format (specified in the README)

This is a project regarding parsing data from different(general) sources and representing it in form of graphs.

AlViz is a research prototype for visual ontology alignment implemented as multiple-view plug-in for Protege using J-Trees and Graphs. Based on similarity measures of an ontology matching algorithm AlViz helps to assess and optimize the alignment results

LeafAnalyser has been developed as a fast throughput leaf shape analysis application. It contains features such as automated image processing, data analysis and interactive 2D/3D graphs.

Actionscript 3 classes currently for easily loading images, movies, with panning, slideshow and other effects. Includes a useful logging class. Also AS2 code for financial charts, pie charts, node graphs, etc. Also AS2/JS classes for stats/data handling.

Helps compatibility with Vernier's Graphical Analysis and Logger Pro software. Includes a converter to extract important data out of Vernier .ga3 and .cmbl data files, and spreadsheet to analyze the data with tables, graphs, and curve fitting.

...While your application is computing and logging results to a CSV file using the LiveGraph Writer API, the plotter lets you visualise and monitor the results live - by instantly plotting charts and graphs of the data.

brillouin dataview allows quick browsing and convenient comparison of scientific data files by displaying thumbnail graphs and recorded parameters directly in the windows file explorer.

Docgen plugin for Protege provides a quick export of all the content of an ontology (classes, instances and documentation) in various formats (html, pdf, fo...). Images, Graphs, URL are readyly included in reports.

Java visual aplication to show graphs. JWykres get data from dabases by jdbc. Aplication can show many dataset on one graph for easy comparison, for example to find interrelation beetwen processes or finding trends.

An open source program that has the ability to graph data collected from scientific experiments. It will fit a variety of linear and non-linear regressions to data and will have the ability to save and print graphs.

AbuGraph is a freely available Java application for the layout and visualization of directed graphs. Bound to a TCP port, it supports dynamic graph creation receiving commands from a telnet console or another third party application.

callgraph is a project that provides an algorithm for an optimal vertex positioning of any connected graph in 3D, as well as the library and sample application for viewing graphs in 3D.