Search Results for "gnu/linux" - Page 12
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Showing 1587 open source projects for "gnu/linux"
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Open Information Integration Tool Suite (Open II) is used by analysts and programmers to accelerate data integration and harmonization across organizations. OpenII has a neutral schema repository for browsing and comparing all sorts of data models. OpenII is built as a Rich Client Platform Application on top of Eclipse 3.x. Developers need to download Eclipse, install the RCP support, the Fatjar plugin and the Delta Pack in one of the 3.x flavors. Release Notes Release Date: Jan...
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UNSW Metadata Stores (ResData)
An institutional research metadata management repository.
ResData is an institutional metadata repository to facilitate effective management, discovery and sharing of institutional research data collections. It integrates with institutional enterprise systems, such as HR and Grant management systems to facilitate re-use of existing information, such as People and Project records. ResData has been developed by the Library Repository Services, University of New South Wales. The work was supported by the Australian National Data Service (ANDS)... -
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R-gregmisc is a set of extension package for the open-source statistical environment/language "R''. It includes functions for plotting (gplots), data manupulation (gdata), modeling (gmodels), and programming tools (gtools), creation and management of sub-processes (fork), determing sample sizes for -omics experiments (ssize), and a variety of other packages.
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scipion-xmipp
Image processing framework to integrate EM software packages.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated... -
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Hunspell is a spell checker and morphological analyzer library and program designed for languages with rich morphology and complex compounding or character encoding. Hunspell interfaces: Curses, Ispell compatible pipe interface, OpenOffice.org UNO module
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GESPA
Accurately predicts disease association of single nucleotide mutations
GESPA (GEnomic Single nucleotide Polymorphism Analyzer) is a bioinformatics tool for classifying Nonsynonymous Single Nucleotide Polymorphisms (nsSNPs). GESPA predicts if a nsSNP is pathogenic using reports from literature and various algorithms to assess conservation in orthologous and paralogous protein alignments. Using reports from literature, GESPA is also able to predict the phenotype of a nsSNP with high accuracy. The software can be used clinically to determine if observed nsSNPs are... -
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P-VCD
Content-Based Video Copy Detection
Software for Video Copy Detection. The software has been described in some scientific papers, e.g. http://dx.doi.org/10.1109/ICME.2011.6012212 and http://dx.doi.org/10.1007/s11042-011-0915-x. This software is the result of my PhD at the University of Chile and the participation at TRECVID Content-Based Copy Detection (CCD) evaluation task 2010 and 2011. More details in http://www-nlpir.nist.gov/projects/tv2011/tv2011.html#ccd and in... -
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GUItars
GUItars is designed for the analysis of high throughput RNAi data.
Please refer to the original article published in PLOS ONE at http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0049386. GUItars's user-friendly graphical interface enables rapid analysis of RNAi and small molecule screens. GUItars uses SSMD for hit selection, which is preferred for its ability to diminish sample size effects and the false hit rate, making it superior to other widely used HTS analysis methods. The program can handle the analysis for screens without... -
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C/C++ Program Perfometer
The program enables to get performance of C/C++ program for any metric
The program enables to get performance of C/C++ program and separated pieces of code for any metrics (for instance : time, memory, metrics defined by user etc.). The measurement results are represented in detailed/summary reports. Latest Version: 2.10 -
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The Thot toolkit repository has moved to http://daormar.github.io/thot/ Thot is a toolkit for statistical machine translation. The new Thot toolkit includes fully automatic and interactive machine translation, incremental training of statistical models, parallel estimation, ...
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ProC 3.0
smart Workflow Engine
ProC 3.0 is a scientific workflow engine to build, manage and execute workflows (pipelines) in heterogeneous environments, supporting GRID and other means of parallel processing. It includes a data management component (DMC) to transparently access databases for storage of results and automatically adds metadata to track the processing of data products, so that at every time a full processing history is available. The software was developed and used within the ESA Planck satellite mission. -
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math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net
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Malware Analysis Network in Taiwan
MAN in Taiwan, MiT
Malware Analysis Network in Taiwan <Man in Taiwan, MiT> Welcome to contact us (TonTon@TWMAN.ORG) if you are interested in collaborating with us. This project is open source and distributed under the GNU General Public License version 3. Please feel free to add to or modify this source and propose changes or new converters. Developer & Copyrighted by : TonTon Hsien-De Huang Prompter: Jazz Yao-Tsung Wang, Figaro Chen-Ho Yang | Logo Desinger:Temaki Guo Community on Google+：http://X.TWMAN.ORG/Community/ SourceForge: https://sourceforge.net/projects/twmanplus/files/ FaceBook: https://www.facebook.com/TWMAN.PLUS -
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Workbench for visualizing biological networks (regulatory, interaction, and metabolic). Can be used as a front-end for BNDB datawarehouses, but also as stand-alone tool.
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MetricKnn
Fast Similarity Search using the Metric Space Approach
MetricKnn is an open source library to address the problem of similarity search, i.e., to efficiently locate objects that are close to each other according to some distance function. MetricKnn is comprised of: * Command Line, which is able to perform similarity searches through console commands. Available for Windows and Linux. * C API, which provides the implementation of different indexes, distances and search methods. * C++ API, which is a thin C++ wrapper of the C API. The intended users are software developers, academics, students and data scientist who need to efficiently compare objects according to some criteria. MetricKnn is an open source project released under the BSD 2-Clause License. ... -
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Text Expander, Inverse summarizer
Expand text, inverse summarizer
IT WILL WORK WITH A JAVA DEVELOPMENT KIT 1.7 ONLY !!! This program is a data-miner and a knowledge-miner. It does exactly the opposite of what the text summarizers do. A text summarizer produces a shortened text given some text as an input. An inverse summarizer takes the shortened input, a similar or a same text and does the process in reverse. This results in an expanded text. It can be used with any text or notes that have the knowledge gaps. It is a great aid to any creative... -
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NDN Backprop Neural Net Trainer implements the backpropagation functionality subset of the open source NeuronDotNet object library in a generic user friendly application.
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NG-CloudMS
Next Gen Cloud Management System (NG-CloudMS)
Next Gen Cloud Management System (NG-CloudMS) is a new web based end-to-end OCX management tool that is distributed by Opt/Net under GNU Public License (GPL). This prototype provides near real-time visibility of the networks and cloud infrastructures and interconnected computing and data storage resources. It therefore can assist the operators with visualisation and localization of the causes of potential incidents. -
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Advanced Normalization Tools ( ANTs )
Multidimensional image registration, segmentation and statistics
*** This is an archive only, please see https://github.com/ANTsX for this and other ANTsX tools *** Image registration with variable transformations (elastic, diffeomorphic, diffeomorphisms, unbiased) and similarity metrics (landmarks, cross-correlation, mutual information, etc). Image segmentation with priors & nonparametric, multivariate models. *** Current ANTs code, binaries (Mac, Windows, Linux) and support is hosted at Github *** https://github.com/ANTsX/ANTs Docker hub: https://hub.docker.com/u/antsx Older code and binaries remain available here on SourceForge (1.9x, pre 2014). If you are new to ANTs you should probably go to Github and get the latest code. -
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MinerBuddy
Something simpler than R and focused on visualisation
Something simpler than R and focused on visualization of multivariate float datasets. Developed mostly for my personal use, but can't exclude the possibility that it will be useful for someone else. -
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SoNIA (Social Network Image Animator)
Social Network Image Animator creates animations of network data
SoNIA (Social Network Image Animator) is a Java-based package for visualizing dynamic or longitudinal network data and rendering it out as animations. The home page with examples is located at http://sonia.stanford.edu Documentation is at https://sourceforge.net/p/sonia/wiki/Main_Page/ -
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wmtsa-python
Discrete wavelet methods for time series analysis using python
Several python libraries implement discrete wavelet transforms. However, none of them, or at least none that I know, is aimed at scientific use. This library aims at filling this gap, in particular considering discrete wavelet transform as described by Percival and Walden. This module started as translation of the wmtsa Matlab toolbox (http://www.atmos.washington.edu/~wmtsa/), so most naming conventions and most of the code structure follows their choices. The code uses a mix of python and... -
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DCTFinder
Extract title and creation time from web page.
Web pages do not offer reliable metadata concerning their creation date and time. However, getting the document creation time is a necessary step for allowing to apply temporal normalization systems to web pages. DCTFinder is a system that parses a web page and extracts from its content the title and the creation date of this web page. DCTFinder combines heuristic title detection, supervised learning with Conditional Random Fields (CRFs) for document date extraction, and rule-based creation... -
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C++, Matlab and Python library for Hidden-state Conditional Random Fields. Implements 3 algorithms: LDCRF, HCRF and CRF. For Windows and Linux, 32- and 64-bits. Optimized for multi-threading. Works with sparse or dense input features.
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