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Wienert S, Heim D, Kotani M, Lindequist B, Stenzinger A, Ishii M, Hufnagl P, Beil M, Dietel M, Denkert C, Klauschen F. CognitionMaster: an object-based image analysis framework. Diagn Pathol 2013, 8:34
Software collection for zebrafish image processing
Software collection for zebrafish image processing (under construction), including an Excel table for related tools and method papers, see also survey paper:
Mikut, R.; Dickmeis, T.; Driever, W.; Geurts, P.; Hamprecht, F.; Kausler, B. X.; Ledesma-Carbayo, M. J.; Marée, R.; Mikula, K.; Pantazis, P.; Ronneberger, O.; Santos, A.; Stotzka, R.; Strähle, U. & Peyriéras, N. Automated Processing of Zebrafish Imaging Data - A Survey Zebrafish, 2013
LBP implementation in multiple computing platforms (ARM,GPU, DSP...)
...This is a software toolbox that collects software implementations of the Local Binary Pattern operator in several platforms:
- OpenCL for CPU & GPU
- OpenCL for GPU (branchless)
- C code optimized for ARM
- OpenGL ES 2.0 shaders mobile GPUs
- C code for TI C64x DSP core (branchless)
- C code for TTA processor synthesis
If you use the code somewhere, please cite:
Bordallo López M., Nieto A., Boutellier J., Hannuksela J., and Silvén O.
"Evaluation of real-time LBP computing in multiple architectures,"
Journal of Real Time Image Processing, 2014