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OpenMed is an open-source healthcare AI and medical NLP toolkit designed to turn clinical text into structured insights using transformer-based models and production-oriented interfaces. Its core purpose is to provide specialized medical entity extraction, PII detection and de-identification, assertion-aware analysis, and related healthcare text processing capabilities without locking users into a proprietary platform. The project includes a curated registry of more than a dozen medical NER...
TorchIO is an open-source Python library for efficient loading, preprocessing, augmentation and patch-based sampling of 3D medical images in deep learning, following the design of PyTorch. It includes multiple intensity and spatial transforms for data augmentation and preprocessing. These transforms include typical computer vision operations such as random affine transformations and also domain-specific ones such as simulation of intensity artifacts due to MRI magnetic field inhomogeneity...