Search Results for "download"

...To use this library, you need to have Java 7+ installed on your system as tika-python starts up the Tika REST server in the background. To get this working in a disconnected environment, download a tika server file (both tika-server.jar and tika-server.jar.md5, which can be found here) and set the TIKA_SERVER_JAR environment variable to TIKA_SERVER_JAR="file:////tika-server.jar" which successfully tells python-tika to "download" this file and move it to /tmp/tika-server.jar and run as a background process. This is the only way to run python-tika without internet access. ...

corona is an exploratory bioinformatics project that applies reverse-engineering ideas to SARS-CoV-2. It treats biological information processing as an analogy to software analysis to help explain the viral genome from first principles. Python scripts download genomic sequences from GenBank and translate RNA into amino-acid chains. The project identifies and annotates proteins encoded by the genome. It also experiments with OpenMM for molecular simulation and protein-folding work. Supporting data, protein resources, vaccine-related material, research questions, and analysis notes make the repository a hands-on workspace for studying viral structure and genetics.