Search Results for "bcftools-windows"
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Showing 339 open source projects for "bcftools-windows"
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OpenBoxes
Manage inventory and track stock movements for healthcare facilities
OpenBoxes is an open‑source inventory and supply chain management system tailored for healthcare and disaster-relief logistics. It allows tracking of stock movements, warehouse-to-ward distribution, order requests, and shipment management—deployed in countries like Haiti, Rwanda, Liberia via Partners In Health. -
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Kangaroo
Kangaroo is an AI-powered SQL client and admin tool for popular dbs
Kangaroo is an AI-powered SQL client designed to enhance database interaction by integrating large language model capabilities into query workflows. It allows users to write, analyze, and optimize SQL queries using natural language assistance, making database operations more accessible and efficient. The tool is intended for developers, analysts, and data professionals who want to simplify complex query generation and debugging processes. It integrates with databases to provide context-aware... -
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Rundeck
Enable self-service operations, give specific users access
Rundeck is an open-source automation service with a web console, command line tools and a WebAPI. It lets you easily run automation tasks across a set of nodes. There are several top-level targets for a full Rundeck build, but there are also ways to only build the lower-level components during development or testing. Rundeck is the leading runbook automation platform. Delegate self-service automation to operate faster and eliminate toil. Rundeck is the open source core of Rundeck products.... -
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Dict UK
Project to generate POS tag dictionary for Ukrainian language
A Java-based tool for generating full morphological dictionaries for Ukrainian, applying affix rules to base lexemes to produce all inflected forms with part-of-speech tags—used for natural language processing and spell-checking. -
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Axion Release Plugin
Gradle release & version management plugin
A Gradle plugin for automating semantic versioning in SCM-centric workflows: it computes version from Git tags, manages SNAPSHOT suffixes, performs tagging, and handles version bumps—streamlining release processes. -
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Grgit
The Groovy way to use Git
Grgit is a Groovy‑friendly wrapper around Eclipse JGit that simplifies Git operations within Groovy scripts or Gradle builds. It provides a cleaner, fluent API for common Git tasks (clone, commit, tag, branch), and ships as a Gradle plugin for easy project integration. -
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Badass JLink Plugin
Create a custom runtime image of your modular application
This Gradle plugin automates creation of custom runtime images using the Java jlink tool, producing small, self-contained distributions tailored to your application’s module graph. It analyzes your app’s modules (and dependencies) to include only the JDK modules you actually need, which substantially reduces footprint versus shipping a full JRE. The plugin generates launchers, start scripts, and archive layouts ready for distribution or Docker layering. It offers rich configuration for JVM... -
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Gradle Lint Plugin
Linter tool for identifying and reporting on patterns of misuse
The Gradle Lint Plugin is a static analysis tool for Gradle build scripts (written in Groovy) that finds patterns of misuse, deprecated constructs, and opportunities for optimization in build configurations. It functions analogous to ESLint in the JavaScript ecosystem: you define rules, apply them across the build scripts, and get warnings or errors when code deviates from best practices. It is particularly useful for maintaining consistency across large, multi-module projects or monorepos,... -
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docToolchain
AsciiDoc Toolchain for technical Software Documentation
docToolchain is a toolkit built around the “docs as code” philosophy, designed to make writing, maintaining, and publishing technical documentation as smooth as software development itself. It provides a suite of scripts and integrations to generate documentation from AsciiDoc (and related formats), run automated checks, incorporate diagrams, and publish outputs in different formats (HTML, PDF, etc.). The framework encourages documentation and architecture artifacts to live alongside source... -
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Gradle Git Version
A Gradle plugin that uses `git describe` to produce a version string
This Gradle plugin derives your project’s version directly from the state of the Git repository, turning tags and commits into consistent semantic versions. It reads the most recent tag, the number of commits since that tag, and whether the working tree is dirty, then composes a deterministic version string. Teams can enforce patterns (for example, treating non-tagged builds as snapshots) and keep CI builds reproducible without hardcoding versions in build.gradle. The plugin integrates with... -
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Gradle Task Tree
Gradle plugin that adds a 'taskTree' task that prints task dependency
A Gradle plugin that adds a taskTree task to your build. Running it prints out a hierarchical, easy‑to‑read task dependency tree, helping you visualize the build execution order. -
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Protobuf Gradle Plugin
Protobuf Plugin for Gradle
An officially supported Gradle plugin that automates Protocol Buffers (.proto) compilation, code generation, and integration with gRPC across various source sets. It simplifies protobuf setup, supporting multiple languages and output configurations. -
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nextflow
A DSL for data-driven computational pipelines
Nextflow is a powerful workflow orchestration tool designed for the development and execution of data-intensive pipelines, especially in the field of bioinformatics. It enables reproducible and portable workflows that can run seamlessly across different environments including local, HPC clusters, and cloud platforms. With support for containers and software package managers, Nextflow makes it easy to define complex data processes using a concise DSL and manage dependencies efficiently. -
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Pipeline Model Definition Plugin
Dfine CI/CD workflows using Jenkinsfile
The Pipeline Model Definition Plugin introduces Declarative Pipelines in Jenkins—offering a more structured, configuration-like syntax for defining CI/CD workflows using Jenkinsfile. It simplifies pipeline creation, gives clearer semantic error messages, supports post-build steps, and is fully extensible via APIs. -
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IHUB Plugins
A set of Gradle plugins that greatly simplify project management
A collection of Gradle plugins designed to simplify project setup, versioning, dependency management, Spring Boot configuration, GraalVM support, and more, tailored for IHub’s monorepos and enterprise workflows. -
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Thymeleaf Layout Dialect
A dialect for Thymeleaf that lets you build layouts
Thymeleaf Layout Dialect is an extension for the Thymeleaf templating engine that enables a layout/decorator mechanism, letting you define base templates and inject fragments for reusable and maintainable page structures, eliminating the need for third-party layout libraries. -
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Gradle Release
Plugin for providing a Maven-like release process for Gradle projects
This Gradle plugin provides a Maven-like release workflow (gradle release). It automates version bumping, snapshot removal, build, tagging, branch switching, and next-version prompt—compatible with Git, SVN, Bazaar, and Mercurial. -
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Gradle License Plugin
Gradle plugin that provides a task to generate a HTML license report
The Gradle License Plugin helps developers manage and audit software licenses for dependencies in Android and Java projects. It automatically detects third-party libraries and generates a report containing license details. This is particularly useful for ensuring compliance with open-source licenses, making it easier for teams to identify potential legal issues or attribution requirements before releasing software. -
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Grails
Grails - the Web Application Framework
Grails is an open‑source, full‑stack web application framework built on the Groovy language and the Java platform. It emphasizes “coding by convention” to streamline development by reducing configuration, leveraging Spring Boot, Hibernate, and integrated DSLs for rapid productivity. Supports expressive DSLs for validation, querying, and view rendering. High‑productivity web framework adopting “coding by convention” paradigm. Rich IDE support across IntelliJ IDEA, Eclipse, Sublime, and... -
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Job DSL Plugin
Define Jenkins jobs using Groovy-based domain-specific language
The Job DSL Plugin allows Jenkins users to define and manage their jobs using a Groovy-based domain-specific language (DSL). This enables infrastructure-as-code for Jenkins jobs, making CI/CD pipelines reproducible, version-controlled, and easy to update. The plugin simplifies the creation of complex build configurations and supports templates, conditional logic, and job generation through scripts. -
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Skills Service
SkillTree is a micro-learning gamification platform
Skills Service is an open-source microservice developed by the NSA that provides gamified skills tracking for developers. It enables organizations to define, track, and reward skill acquisition and progress through a customizable and modular system. Developers earn points and levels by completing tasks or learning activities, with progress tracked via a web UI or REST API. It is designed to foster a culture of continuous learning, provide visual skill feedback, and promote user engagement... -
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Docker Gradle Plugin
Gradle plugin for orchestrating docker builds and pushes
a Gradle plugin for orchestrating docker builds and pushes. Add basic tasks for building and pushing docker images based on a simple configuration block that specifies the container name, the Dockerfile, task dependencies, and any additional file resources required for the Docker build. Adds a task for populating placeholders in a docker-compose template file with image versions resolved from dependencies. Adds tasks for starting, stopping, statusing and cleaning up a named container based... -
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Clouddriver
Read and write operations across cloud providers
Clouddriver is the cloud-provider integration layer of Spinnaker, exposing a uniform API and cache for infrastructure resources across multiple clouds. It discovers and tracks entities such as server groups, load balancers, security groups, images, and instances, normalizing them so higher-level services can reason consistently. The service also brokers mutating operations—like creating server groups or resizing clusters—by translating Spinnaker requests into provider-specific calls. A... -
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Groovy Geb
Apache Geb: Very Groovy Browser Automation
Geb (pronounced “jeb”) is a Groovy-based browser automation framework that combines Selenium WebDriver under the hood with Groovy's concise DSL and jQuery-like content selection. It embraces the Page Object pattern and provides elegant browser automation scripts with expressive, readable syntax. Expressive, concise syntax ideal for functional-style test scripts. Open-source under Apache 2.0, with Apache Groovy community support. jQuery-like selectors for intuitive content targeting.... -
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JenkinsPipelineUnit
Framework for unit testing Jenkins pipelines
This testing framework lets you write unit tests on the configuration and conditional logic of the pipeline code, by providing a mock execution of the pipeline. You can mock built-in Jenkins commands, job configurations, see the stacktrace of the whole execution and even track regressions.
