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Showing 2 open source projects for "notation"

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    STON

    Translator of SBGN PD and AF maps into Neo4j graph database.

    STON, Sbgn TO Neo4j, is a Java-based framework that imports and translates metabolic, signalling and gene regulatory pathways presented in SBGN (Systems Biology Graphical Notation, http://www.sbgn.org) Process Description (PD) and Activity Flow (AF) languages to a graph-oriented format compatible with Neo4j (http://neo4j.com/). STON1.2 allows also to link common processes between two different PD maps. This framework uses two sets of libraries: LibSBGN and Neo4j libraries. Requirements: Java 1.8 is necessary. ...
    Downloads: 0 This Week
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    prOOst - wisdom through provenance
    prOOst is a provenance storing system, which allows users to store their provenance information in OPM notation. It is based on a graph database and can be accessed for querying and adding of information through a REST interface.
    Downloads: 0 This Week
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