Search Results for "sequence scaffold, java"

...This means you can keep much of your familiar Java-based architecture (controllers, filters, dependency injection) and deploy it in a serverless environment without rewriting everything from scratch. The project supports multiple framework flavors and versions, provides archetypes (Maven/Gradle) to scaffold applications, and maintains separate branches for legacy (Java EE/1.x) and modern (Jakarta EE/2.x+) ecosystems.

Java bio-informatics library to analyze and convert genomic sequence and assembly data. This library was created and used by the J. Craig Venter Institute (JCVI)

This project makes the compiler and tools for the Panini language available. A central goal of the Panini language is to make concurrent programming easier and less error-prone. The main new feature in Panini is called a capsule. A capsule is like an actor but better because it largely retains the traditional approach for reasoning about programs as a sequence of operations, abstracts away all details of thread creation and locking, and supports fully-automatic compile-time analysis of...

...It takes advantage of the data integration capabilities in the SM2PH-Central Framework(KD4v,MSV3d,BIRD,..), combined with in-house developed gene prioritization methods. It currently incorporates six prioritization modules, based on gene sequence, protein-protein interactions, gene expression, disease-causing probabilities, genomic context). GEPETTO is written in Java/Python and supported by an advanced modular architecture, which means that it can easily be modified and extended by the user, in order to include alternative scoring methods and new data sources. We intend to extend the system from gene-level to variant-level prioritization, by exploiting the variant data in the MSV3D database. ...

An event driven software system for easy and efficient streaming of structured data. Instead of creating temporary objects and holding them in lists for passing around, chain$tar streams data directly to a sequence of chained methods.

Tester2 is simple test framework for functional testing of server applications (j2ee: jms, ejb, tibco, oracle, file, custom). Its tests are command driven, does not need any knowledge of programming.

Framework that adds security functions to Java web applications. It is used as an add-on for Struts framework. It is written in Java and provides web-commands for java web pages and provides several security services such as sequence control invocation.