Open Source Windows Ecosystem Sciences Software
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Ecosystem Sciences Software for Windows
View 31 business solutionsBrowse free open source Ecosystem Sciences software and projects for Windows below. Use the toggles on the left to filter open source Ecosystem Sciences software by OS, license, language, programming language, and project status.
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ToxTrac 2026
Free Animal Tracking Software
ToxTrac is a free Windows program optimized for tracking animals. It uses an advanced tracking algorithm and includes Preprocessing, Background subtraction, Advanced collision and occlusion management, Post-processing, and Filters. It is robust; very fast; and can handle one or several animals in one or several environments. The program provides useful statistics as output. ToxTrac can be used for fish, insects, rodents, etc. If used, please cite: Rodriguez, A., Molares-Ulloa, A., Andersson, M., and Brodin, T. (2026). ToxTrac 2026 (1.4). Universidade da Coruña. https://doi.org/10.5281/zenodo.20393895. Rodriguez, A., Zhang, H., Klaminder, J., Brodin, T., Andersson, P. L. and Andersson, M. (2018). ToxTrac: a fast and robust software for tracking organisms. Methods in Ecology and Evolution. 9(3):460-464. https://doi.org/10.1111/2041-210X.12874. Contact and Support: Alvaro Rodriguez (Main Developer), a.tajes@udc.es Magnus Andersson, magnus.andersson@umu.se -
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openLISEM
A spatial runoff, soil erosion and flooding model
An nopensource runoff, erosion and flood model openLISEM. There are two branches: - the classic openLISEM that you can find here: https://github.com/vjetten/openlisem/, please contact Victor Jetten (v.g.jetten@utwente.nl) for details. - the multihazard version of LISEM on this page, for details contact Bastian van den Bout (b.vandenbout@utwente.nl). This software is made available under the licence GPL v3. -
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An easy to use application to design your kitchen garden or your house farm. Helps you plan your plants ( vegetables, fruit trees, herbs, flowers ) so that it respects the rules of crop rotation and companion planting. Based on square foot gardening. Requires Java 8.
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openLCA
professional open source software for LCA
Software for sustainability assessment, highly modular; initially focused on Life Cycle Assessments. -
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Piko stats
Piko solar inverter data communicator and manager
Piko solar inverter interface. Get online real time data and status. Get also history data. Database management of data. Exports, graphs, ... Manage data and stats using a SQLite or MySQL database. Third party intergration. See the Wiki home page for more informations. -
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Niche Analyst (NicheA) was developed based on the BAM framework which allows users to create virtual spaces and virtual species, and to analyze ecological niches in both multivariate environmental and geographic spaces, linking views of the niche in the two spaces. The unique functionality in NicheA, not available in other software programs, is estimating Grinnellian niches of species based on environmental variables and occurrence records, but with a clear focus on fundamental ecological niches. NicheA can display ecological niches; calculate their shape, density, location, and other attributes; and quantify similarity among multiple niches.
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PAMGUARD
Detection Classification and Localisation of marine mammals
The PAMGUARD project develops software to help detect, locate and classify marine mammals using Passive Acoustic Monitoring. This project is being migrated to github at https://github.com/PAMGuard. Please go there for the latest updates. thank you sourceforge for hosting us for all these years. -
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Virtual Laboratory Environment
A multi-modeling and simulation environment to study complex systems
VLE is a multi-modeling and simulation environment to study complex dynamic systems. VLE is based on the discrete event specification DEVS. and it implements the DSDE formalism (A merge of Dynamic Structure DEVS, DSDEVS, with Parallel DEVS, PDEVS). VLE provides a complete set of C++ libraries, called VFL (VLE Foundation Libraries), to develop DEVS models, to gets results of simulations, to launch simulation on cluster. The models can be developed with the DEVS formalism or with the classical mathematical formalism: Ordinary Differential Equation with Euler, Range-Kutta or QSS integrator, Finite state automaton (FDDEVS, UML State chart, Hybrid Petri net). The VLE environment provides an IDE to develop C++ models, DEVS coupled models. VLE have also three ports to use the VFL with Python, Java and R programming languages. -
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IPAT-S is a scenario modeling language. Use it for rapid development of quantitative strategic scenarios for governments, agencies, businesses, etc. using a fast and compact interpreted language. Package includes IPAT Studio development environment.
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Biogenesis Color Mod
Mod for evolution simulation and artificial life program Biogenesis
You can download the Color Mod at the Biogenesis main site too (included in the main download now). You also find the sourcecode there. If you want to post a review, remember that this is only a modification, so comment on my changes, not on the simulation. Original project by Joan Queralt Molina: https://sourceforge.net/projects/biogenesis/ Includes Tyler Colemans "Features Mod": https://sourceforge.net/projects/biogenesisfeatu/ Biogenesis discussion forum: https://sourceforge.net/p/biogenesis/discussion/ Biogenesis runs faster (at least for myself) if you open a Google Chrome window (don´t know why :D) -
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R Tools for Biologists (RT4Bio) is a multi-functional package writen in R language developed in the Laboratory of Behavioral and Computational Ecology at State University of Montes Claros - MG - Brazil. Formerly known as RRJ.
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RealMeteo
RealMeteo: automated browser to slide show sat/webcam meteo pictures
RealMeteo is a custom automatic browser that display automatically satellite weather pictures and webcams. RealMeteo build a meteo point with a single pc connected to web. Many satellite pictures are available on web, and RealMeteo downloads automatically them at time scheduled, and then displays in a slide show the selected pictures. It is the ideal solution for hotels, business centers, train stations, airports and more. JPG AniGIF PNG support. RealMeteo is freeware for personal and no-profit use. Professional users have to pay fee of 36.60 euros (association membership that is free for no-profit users). -
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DeepSee
Visualize deep ocean biogeochemical sediment samples in 2D and 3D!
DeepSee is an interactive workspace for deep ocean scientists to upload sediment core data and map images and see their sampling history displayed across multiple connected views at once! 🦑🦀🐚 🚀 For a live demo, visit: https://www.its.caltech.edu/~datavis/deepsee/ 🌱 To get started, visit our Wiki: https://sourceforge.net/p/deepsee/wiki/Home/ 🧑💻 To modify DeepSee for your own project, visit our GitHub repository: https://github.com/orphanlab/DeepSee/ --- Created by Adam Coscia, Haley M. Sapers, Noah Deutsch, Malika Khurana, John S. Magyar, Sergio A. Parra, Daniel R. Utter, Rebecca L. Wipfler, David W. Caress, Eric J. Martin, Jennifer B. Paduan, Maggie Hendrie, Santiago Lombeyda, Hillary Mushkin, Alex Endert, Scott Davidoff, and Victoria J. Orphan. Copyright (c) 2022-23 California Institute of Technology ("Caltech"). U.S. Government sponsorship acknowledged. All rights reserved. Open Source License Approved by Caltech/JPL APACHE LICENSE, VERSION 2.0 --- -
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Habfuzz
A command-line tool for data-driven fuzzy modelling
Input 1 - A training dataset (multiple observations) of up to four variables (predictors) against one (response variable) Input 2 - A test dataset (multiple observations) of the same four variables with unknown response variable Output - Calculation of the response variable for each test observation using fuzzy logic or fuzzy rule-based Bayesian algorithms HABFUZZ is a habitat model, which can be used in ecohydraulic modelling applications for the calculation of the instream habitat suitability in various discharge scenarios in a simulated river reach. It comes with no graphical user interface but it's a one-click tool. Just provide your input and let HABFUZZ provide you the output. The HABFUZZ manual https://github.com/chtheodoro/habfuzz/blob/master/HABFUZZ_v2.5_manual.pdf HABFUZZ in the Journal of Open Source Software http://joss.theoj.org/papers/1ad27db8f0976c28a75e20d34eba5ee2 HABFUZZ website https://chtheodoro.wixsite.com/habfuzz -
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Luscinia is a program for archiving and analyzing field sound recordings (especially of animals). It incorporates an interface to a database, spectrogram measurement algorithms, sound comparison algorithms, and statistical analysis.
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DLESE (Digital Library for Earth System Education) is a community-supported digital library dedicated to the collection, enhancement, and distribution of materials that facilitate learning about the Earth. Sponsored by the US National Science Foundation.
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TRiDaS is a universal data exchange standard for the dendrochronology community. This project contains the data standard itself as well as libraries and tools useful for reading, writing and converting dendro data files.
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Woodland Potential Calculator
Woodland potential calculator GIS presentation application
The Forestry Commission and Natural England commissioned a bespoke data collection and presentation tool for calculating the potential for increasing the extent of tree cover across the north west of England. The data was divided into sub-regions by landscape type using Natural England's Character Area classifications. The potential within each of these Character Areas was then estimated by working groups of local experts who were capable of making reasoned assessments of both the opportunities and constraints to woodland creation. Subsequently, this project was considerably extended and adopted as a national system. It is currently being used to compile the National Woodland Potential dataset for the whole of England. -
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iTag
Tag images using various categories and modifiers
iTag has been designed for researchers that rely on photographic census techniques of animals that are hard to detect via image recognition algorithms and was originally developed for counting Grey Seals in the German wadden sea during March 2013. It has since then been further expanded and has now reached beta status. iTag allows Users to define up to 9 different categories and name them accordingly. In addition, 4 modifiers are available to further increase the options during a tagging session. Users are able to load a series of Images into a session and add tags on objects on these images within previously defined categories and modifiers. Upon ending the session, result files are produced including (if provided by the EXIF data) the gps information for each Picture, the number of objects in each category and a detailed result file that describes each individual object. In addition, all images that were tagged are saved. -
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A tool for extracting climate parameters from Tyndall climate datasets for a certain area and time based on diferrent models and emission scenarios.
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u/sbmv2012
Taxonomy assignment of metazoans using a python based pipeline
The aim of this project is to create an automated pipeline for taxonomic assignment of DNA sequences obtained from environmental samples. We develop a series of python scripts to process the raw sequence data obtained from benthic environmental samples and to taxonomical assignment of these sequences and finally to integrate all data in a relational database. -
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This software enable cannabis grower to manage and retrieve statistics about culture, tools included have the goal to help growing indoor cannabis.
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R package for analysis of ichthyoplanckton data. Please visit the ichthyoanalysis WIKI for more information and for collaboration
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Biosphere3D
Interactive landscape rendering based on a virtual globe.
Biosphere3D targets interactive landscape rendering based on a virtual globe. It supports DEM, satellite and aerial images, 3D models (Collada), 3D plant models, and Shapefiles. Biosphere3D was initially developed by the landscape visualization group of the Zuse Institute Berlin by Malte Clasen and is now developed further by Lenné3D GmbH. For more information about the used concepts have a look at the thesis of Malte Clasen: Towards Interactive Landscape Visualization Doctoral Thesis published 2011 via Technische Universität Berlin https://doi.org/10.14279/depositonce-3005 -
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BETR-Research (BETRS) is a modelling framework to create spatially resolved multimedia models for the environmental fate- and transport of chemical contaminants. It is intended to serve the research community and can be used as a teaching tool.
