58 programs for "bio-bwa" with 2 filters applied:

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  • 1
    The Open ISES Project
    Open Information Systems for Emergency Services (Open ISES) is a community of software developers, paramedics, EMTs, law enforcement & fire fighters working together to create open source software & training materials for the emergency service community.
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    Downloads: 98 This Week
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  • 2
    ECOLOG

    ECOLOG

    A database management system for ecological field surveys

    ECOLOG is a specimen-based, cross-platform relational database management system, aimed at the storage, retrieval and preliminary analysis of data on sites, species, and specimens gathered in ecological field surveys and biodiversity inventories. The main goal of ECOLOG is to make the data gathered in ecological field surveys readily accessible, providing lists of species collected in the study area and informations on habitat preferences, abundance or rarity of a given species, biometrics,...
    Downloads: 2 This Week
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  • 3
    Patlac--Xml2cpp is a totally customizable code generator that generates classes (c++ for now) automatically from a xsd schema. Classes are described in google-ctemplate files and a xml options file allow precise definition of projects.
    Downloads: 0 This Week
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  • 4
    Acacia

    Acacia

    A generic biodiversity database management system

    An interactive data entry, querying, and editing system based on a generic conceptual schema for taxonomic databases. It combines the automated use of scientific names and synonyms in a species checklist with online access to geographical data and common knowledge data (morphological descriptors, genomics, ecology, vernacular names, economic uses, structured notes and conservation status) about the species. All these data can be cross-indexed to a citation list. The design and standard...
    Downloads: 0 This Week
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  • 5
    Generic Model Organism Database Project
    GMOD is a set of interoperable open source software components for visualizing, annotating, and managing biological data. See http://gmod.org for more.
    Downloads: 8 This Week
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  • 6
    The Neurophysiological Biomarker Toolbox
    NBT is an open source Matlab toolbox for the computation and integration of neurophysiological biomarkers. NBT allows for easy implementation of new biomarkers, and incorporates an online wiki with extensive help and tutorials.
    Downloads: 0 This Week
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  • 7
    OpenCryobank
    OpenCryobank is an attempt to develop a simple, free and open database system for frozen samples inventory in biological laboratories. It is mainly aimed at semen and embryo cryobanks, but it can be used for any kind of biological sample. Visit us: http://reprobio.unileon.es/services/analisis-cromatina-espermatica/
    Downloads: 0 This Week
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  • 8
    XMLPipeDB is a suite of tools for building relational databases from XML sources with minimal manual processing of the data. While the applicability is general, our motivation was to facilitate the management of biological data from different sources.
    Downloads: 0 This Week
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  • 9
    Taxy is a tool for browsing and quering data organized as a taxonomy. Through the use of plugins it allows to connect to different data sources, such as the NCBI species taxonomy or the catalogue of biomedical services of the EU project ACGT.
    Downloads: 0 This Week
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  • 10

    Pyntrez NCBI Database Client

    Command-line, Entrez, NCBI e-utilities client, written in Python

    Comman-line client to Entrez, e-utilities, written in Python, developed for Linux
    Downloads: 0 This Week
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  • 11
    mx is a Ruby/Rails code base with broad application in evolutionary biology, it includes general functionality for matrix handling, sequence management, ontology construction, specimen handling, taxonomic catalogs, taxonomic descriptions and more
    Downloads: 0 This Week
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  • 12
    Clover

    Clover

    a simple lab information management system (LIMS)

    Clover is a simple lab information management system (LIMS) designed for biology labs, especially plant biology labs. It provides an easy way to manage and handle the information of lab material, catalogs (inventories), and orders. USE PHP 5.*! Clover will not work on PHP 7.*! The wiki page contains detailed help documents: https://sourceforge.net/p/cloversystem/wiki/Home/ For lab instrument scheduling, please use Cloveriver: https://sourceforge.net/projects/cloveriver/ Please...
    Downloads: 2 This Week
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  • 13
    ClinStudyWeb is designed to provide a flexible infrastructure for managing patient and assay data from clinical studies. It uses a plugin system for study-specific web forms and arbitrarily complex test classifiers, and supports XML import/export.
    Downloads: 0 This Week
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  • 14
    Standard chart of accounts ("Standardkontenrahmen") as needed by accounting software to meet German requirements. Includes tax automatics, data for creating "Umsatzsteuervoranmeldung", "BWA", "GuV" and "Bilanz" and utils for different accounting software.
    Downloads: 0 This Week
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  • 15
    MRS is a tool to quickly and easily store and index large flat file databanks and in a space efficient manner. It is currently used to index huge bioinformatics databanks but it is not limited to this area.
    Downloads: 0 This Week
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  • 16
    RepMiner takes a graph theory approach to the classification and assembly of the repetitive fraction of genomic sequence data. Sequence lengths analyzed by RepMiner can range from full length transposable elements to low coverage sample sequence data.
    Downloads: 0 This Week
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  • 17
    Web application to make user-friendly requests on large XML database. Tools to XML-ize large bodies of semi-formal texts (like floras). Computer-assisted specimen identification. Uses natural language processing, 2D/3D images analysis and generation.
    Downloads: 0 This Week
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  • 18
    OpenVista (R)
    OpenVista(R) is the open-source version of VistA, an enterprise grade health care information system developed by the U.S. Veterans Affairs and deployed at 1,500 global facilities. OpenVista is a registered trademark of Medsphere Systems Corporation
    Downloads: 17 This Week
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  • 19
    ASSD is a simple biological sample database focused on the storage of proteomics data. It tracks every processing step incl. results throughout a sample's lifetime. Next to proteomics data it can also store other results like FACS or Western Blots.
    Downloads: 0 This Week
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  • 20
    A database and a web front end for physiologic data on animal feeding, developed with PostgreSQL and Django at NESCent (http://www.nescent.org) for Mammalian Feeding Working Group (http://www.feedexp.org). Current development of the codebase is on Github at http://github.com/NESCent/feedingdb.
    Downloads: 0 This Week
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  • 21
    Microarray Gene Expression Database Group and OMG Gene Expression Standard (MAGE)
    Downloads: 0 This Week
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  • 22
    A collection of tools for working with the comparative data analysis ontology including import/export facilities for common phylogenetic file formats, and also a triple-store framework.
    Downloads: 0 This Week
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  • 23
    Ruby Research Wiki (RRiki) can be used to keep notes and organize references for research. It uses a browser interface, an intuitive plain text formatting language (markdown), and facilities to cross-reference and hierarchically organize notes
    Downloads: 0 This Week
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  • 24
    A database schema and web application to archive, search, share, and download data of maximum body sizes of different taxonomic groups during the history of life on earth.
    Downloads: 0 This Week
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  • 25
    Neurospaces is a development center for tools in computational neuroscience. See http://www.neurospaces.org/
    Downloads: 0 This Week
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