Open Source Windows Data Visualization Software - Page 96

A widget enabling interactive graph visualization with cytoscape.js in JupyterLab and the Jupyter Notebook.

Algorithm Visualizer for IPython/Jupyter Notebook. If you use the display(TracerObject) code from where you want to see, you can use it without any special modification.

3d plotting for Python in the Jupyter notebook based on IPython widgets using WebGL. Create quiver plots (like scatter, but with an arrow pointing in a particular direction). Render in the Jupyter notebook, or create a standalone html page (or snippet to embed in your page). Render in stereo, for virtual reality with Google Cardboard. Animate in d3 style, for instance, if the x coordinates or color of a scatter plots changes. Animations / sequences, all scatter/quiver plot properties can be a list of arrays, which can represent time snapshots.

Signaling pathways are complex and intertwined processes. The perturbation of biological systems can reveal the complicated interplay and dependencies of pathway components. isiKnock is a software to automatically conduct and visualize in silico knockouts for signaling pathways (Hannig et al. 2019). isiKnock predicts the knockout behavior based on the calculation of signal flows at steady state. For an explanation of the concept of in silico knockouts, we refer to Scheidel et al. 2016 and Amstein et al. 2017. Hannig et al. (2019) isiKnock: in silico knockouts in signaling pathways, Bioinformatics, 35(5), 892–894 Amstein et al. (2017) Manatee invariants reveal functional pathways in signaling networks. BMC systems biology, 11(1), 72. Scheidel et al. (2016) In silico knockout studies of xenophagic capturing of Salmonella. PLoS computational biology, 12(12), e1005200.

IstiChartLib is one of the simplest c++ library for making chart or graph. It is developed using wxWidgets library. For windows, please use IstiChartLib.zip. For Linux (tested on Ubuntu) use IstiChartLib_Linux.tar.gz. For detailed documentation, please visit www.firagiel.com Password to extract: firagiel

FileConv is a set of utility classes that allow java programmers to load/write 3d files of various formats to/from 3d applications and convert between various file formats so that people using different 3d applications can collaborate on the same project

jATLAS is a Java implementation of ATLAS [Architecture and Tools for Linguistic Analysis Systems]. For more information, see http://jatlas.sourceforge.net.

jAeroGrapher is an entirely Java-written Application implementing a layout facility to display relational information about airline flights.

Atrak 3D Visualization Toolkit. Toolkit for the Visualization of 3D datasets produced by the Atrak ray tracing package.

jCAE is a JAVA based environment for CAE applications. It provides meshing and visualization capabilities. It is targetted to run on a maximal number of platform.

jChart is a free Java library for drawing complex business & scientific charts. It may be used in Java applications and applets as a Swing-like GUI component, and also in servlets to publish the charts on the Web in several formats.

This is an attempt to build an Java GUI for a low cost digital storage oscilosope based on a RS232 interface.

Tools for finite automata simulation, minimization and grammar utilities (left recursion removal, context free grammar simplification and transformation to Chomsky Normal Form).

jHepWork (2005-2013) was an environment for scientific computation, data analysis and data visualization for scientists, engineers and students. The program is fully multiplatform (100% Java) and integrated with the Jython (Python) scripting language. Currently the project is known under the name DataMelt (https://datamelt.org)

Optical Design Software for optical systems comprised of light sources, lenses, apertures, prisms, imagers, photometers, etc. Simulate light through the system and compute images and intensities at various locations in the design.

jQuantum is a Java program to simulate a quantum computer, to design quantum circuits, and to visualize the execution of quantum algorithms. Another main purpose, however, is to create images in your head, and thereby - understanding.

jSET - Java Software Evolution Tracker is a software visualization tool that allows practitioners to assess the magnitude of changes across the versions of a software system.

jSVR is an implementation of the Single view 3D reconstruction technique. It allows the recreation of 3D scenes from a single image. It provides a UI that navigates the user through a number of steps from a source image to a complete 3dmodel of the scene

jVisualizer is a graphical tool to visualize and analyse first-order coppling patterns found in NMR-spectroscopy; additional you can type in chemical shifts from an experiment to calculate coupling constants

The jXUL project is an open source project to integrate the XUL language into the Java Platform. There are multiple ways in which this integration will take place. In fact, this project will expand as its members find new ways to integrate these two techn

JAMATO : JAva MAtrix TOols package Provides an easy-to-use class of matrix with MATLAB-like functions. Jamato also includes Data Plots in 2D or 3D, Histograms in 2D or 3D, an expression parser, and some basic statistic simulation tools.

Object Relational Persistence and Object-Based SQL Query API. Similar to that of Hibernate or JDO but much better structured design. This API has several layers of abstraction to be useful for nearly any situation.

Pure Java implementation of an interactive 3d graph rendering engine and editor using a spring embedder algorithm. Nice looking sterile real time 3d environment. Feel free to extend our project and build something awesome, just let us know please :D

jgnuplot is a Java library for interfacing with the gnuplot plotting package which outputs to X11, PostScript, PNG, GIF and other formats.

JLab is a visualization System for the c't Lab. The various modules (IO-Signaling, Frequency, Power Supply) can be viewed and controlled via a Java Swing Interface