Showing 2584 open source projects for "bcftools-windows"

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  • 1
    PETSc.jl

    PETSc.jl

    Julia wrappers for the PETSc library

    This package provides a low level interface for PETSc and allows combining julia features (such as automatic differentiation) with the PETSc infrastructure and nonlinear solvers.
    Downloads: 5 This Week
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  • 2
    Distances.jl

    Distances.jl

    A Julia package for evaluating distances (metrics) between vectors

    A Julia package for evaluating distances (metrics) between vectors. This package also provides optimized functions to compute column-wise and pairwise distances, which are often substantially faster than a straightforward loop implementation.
    Downloads: 5 This Week
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  • 3
    EAGO.jl

    EAGO.jl

    A development environment for robust and global optimization

    EAGO is an open-source development environment for robust and global optimization in Julia. EAGO is a deterministic global optimizer designed to address a wide variety of optimization problems, emphasizing nonlinear programs (NLPs), by propagating McCormick relaxations along the factorable structure of each expression in the NLP. Most operators supported by modern automatic differentiation (AD) packages (e.g., +, sin, cosh) are supported by EAGO and a number of utilities for sanitizing...
    Downloads: 6 This Week
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  • 4
    DynamicHMC

    DynamicHMC

    Implementation of robust dynamic Hamiltonian Monte Carlo methods

    Implementation of robust dynamic Hamiltonian Monte Carlo methods in Julia. In contrast to frameworks that utilize a directed acyclic graph to build a posterior for a Bayesian model from small components, this package requires that you code a log-density function of the posterior in Julia. Derivatives can be provided manually, or using automatic differentiation. Consequently, this package requires that the user is comfortable with the basics of the theory of Bayesian inference, to the extent...
    Downloads: 6 This Week
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  • 5
    ClickVisual

    ClickVisual

    Log analytic and data visualize platform built on clickhouse

    ClickVisual is a lightweight browser-based logs analytics and logs search platform for ClickHouse.
    Downloads: 5 This Week
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  • 6
    CompatHelper.jl

    CompatHelper.jl

    Automatically update the [compat] entries for your Julia dependencies

    CompatHelper.jl is a Julia package which keeps your Project.toml [compat] entries up to date.
    Downloads: 5 This Week
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  • 7
    Calculus.jl

    Calculus.jl

    Calculus functions in Julia

    The Calculus package provides tools for working with the basic calculus operations of differentiation and integration. You can use the Calculus package to produce approximate derivatives by several forms of finite differencing or to produce exact derivatives using symbolic differentiation. You can also compute definite integrals by different numerical methods.
    Downloads: 5 This Week
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  • 8
    FastGaussQuadrature.jl

    FastGaussQuadrature.jl

    Julia package for Gaussian quadrature

    A Julia package to compute n-point Gauss quadrature nodes and weights to 16-digit accuracy and in O(n) time. So far the package includes gausschebyshev(), gausslegendre(), gaussjacobi(), gaussradau(), gausslobatto(), gausslaguerre(), and gausshermite(). This package is heavily influenced by Chebfun.
    Downloads: 5 This Week
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  • 9
    LoggingExtras.jl

    LoggingExtras.jl

    Composable Loggers for the Julia Logging StdLib

    LoggingExtras allows routing logged information to different places when constructing complicated "log plumbing" systems. Built upon the concept of simple parts composed together, subtyping AbstractLogger provides a powerful and flexible definition for your logging system without a need to define any custom loggers. When we talk about composability, the composition of any set of Loggers is itself a Logger, and LoggingExtras is a composable logging system.
    Downloads: 6 This Week
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    MongoDB Atlas runs apps anywhere

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  • 10
    ExplainableAI.jl

    ExplainableAI.jl

    Explainable AI in Julia

    This package implements interpretability methods for black box models, with a focus on local explanations and attribution maps in input space. It is similar to Captum and Zennit for PyTorch and iNNvestigate for Keras models. Most of the implemented methods only require the model to be differentiable with Zygote. Layerwise Relevance Propagation (LRP) is implemented for use with Flux.jl models.
    Downloads: 5 This Week
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  • 11
    LLVM.jl

    LLVM.jl

    Julia wrapper for the LLVM C API

    A Julia wrapper for the LLVM C API. The LLVM.jl package is a Julia wrapper for the LLVM C API, and can be used to work with the LLVM compiler framework from Julia. You can use the package to work with LLVM code generated by Julia, to interoperate with the Julia compiler, or to create your own compiler. It is heavily used by the different GPU compilers for the Julia programming language.
    Downloads: 5 This Week
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  • 12
    AbstractAlgebra.jl

    AbstractAlgebra.jl

    Generic abstract algebra functionality in pure Julia

    AbstractAlgebra is a pure Julia package for computational abstract algebra. It grew out of the Nemo project and provides all of the abstract types and generic implementations that Nemo relies on. It was originally developed by William Hart, Tommy Hofmann, Fredrik Johansson and Claus Fieker with contributions from others. Current maintainers are Claus Fieker, Tommy Hofmann and Max Horn.
    Downloads: 5 This Week
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  • 13
    Mapbox GL JS

    Mapbox GL JS

    Interactive, thoroughly customizable maps in the browser

    Mapbox GL JS is a JavaScript library that uses WebGL to render interactive maps from vector tiles and Mapbox styles. It is part of the Mapbox GL ecosystem, which includes Mapbox Mobile, a compatible renderer written in C++ with bindings for desktop and mobile platforms. Mapbox GL JS is part of the cross-platform Mapbox GL ecosystem, which also includes compatible native SDKs for applications on Android, iOS, macOS, Qt, and React Native. Mapbox provides building blocks to add location...
    Downloads: 7 This Week
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  • 14
    MIRT.jl

    MIRT.jl

    MIRT: Michigan Image Reconstruction Toolbox (Julia version)

    MIRT.jl is a collection of Julia functions for performing image reconstruction and solving related inverse problems. It is very much still under construction, although there are already enough tools to solve useful problems like compressed sensing MRI reconstruction. Trying the demos is a good way to get started. The documentation is even more still under construction.
    Downloads: 5 This Week
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  • 15
    Functors.jl

    Functors.jl

    Parameterise all the things

    Functors.jl provides tools to express a powerful design pattern for dealing with large/ nested structures, as in machine learning and optimization. For large machine learning models, it can be cumbersome or inefficient to work with parameters as one big, flat vector, and structs help manage complexity; but it is also desirable to easily operate over all parameters at once, e.g. for changing precision or applying an optimizer update step.
    Downloads: 5 This Week
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  • 16
    HypothesisTests.jl

    HypothesisTests.jl

    Hypothesis tests for Julia

    HypothesisTests.jl is a Julia package that implements a wide range of hypothesis tests.
    Downloads: 4 This Week
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  • 17
    Surrogates.jl

    Surrogates.jl

    Surrogate modeling and optimization for scientific machine learning

    A surrogate model is an approximation method that mimics the behavior of a computationally expensive simulation. In more mathematical terms: suppose we are attempting to optimize a function f(p), but each calculation of f is very expensive. It may be the case we need to solve a PDE for each point or use advanced numerical linear algebra machinery, which is usually costly. The idea is then to develop a surrogate model g which approximates f by training on previous data collected from...
    Downloads: 5 This Week
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  • 18
    XLSX.jl

    XLSX.jl

    Excel file reader and writer for the Julia language

    XLSX.jl is a Julia package to read and write Excel spreadsheet files. Internally, an Excel XLSX file is just a Zip file with a set of XML files inside. The formats for these XML files are described in the Standard ECMA-376. This package follows the EMCA-376 to parse and generate XLSX files.
    Downloads: 4 This Week
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  • 19
    ParallelStencil.jl

    ParallelStencil.jl

    Package for writing high-level code for parallel stencil computations

    ParallelStencil empowers domain scientists to write architecture-agnostic high-level code for parallel high-performance stencil computations on GPUs and CPUs. Performance similar to CUDA C / HIP can be achieved, which is typically a large improvement over the performance reached when using only CUDA.jl or AMDGPU.jl GPU Array programming. For example, a 2-D shallow ice solver presented at JuliaCon 2020 [1] achieved a nearly 20 times better performance than a corresponding GPU Array...
    Downloads: 6 This Week
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  • 20
    Matplot++

    Matplot++

    Matplot++: A C++ Graphics Library for Data Visualization

    Data visualization can help programmers and scientists identify trends in their data and efficiently communicate these results with their peers. Modern C++ is being used for a variety of scientific applications, and this environment can benefit considerably from graphics libraries that attend the typical design goals toward scientific data visualization. Besides the option of exporting results to other environments, the customary alternatives in C++ are either non-dedicated libraries that...
    Downloads: 6 This Week
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  • 21
    PyVista

    PyVista

    3D plotting and mesh analysis through a streamlined interface

    3D plotting and mesh analysis through a streamlined interface for the Visualization Toolkit (VTK). PyVista is a helper module for the Visualization Toolkit (VTK) that takes a different approach on interfacing with VTK through NumPy and direct array access. This package provides a Pythonic, well-documented interface exposing VTK’s powerful visualization backend to facilitate rapid prototyping, analysis, and visual integration of spatially referenced datasets. This module can be used for...
    Downloads: 6 This Week
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  • 22
    folium

    folium

    Python data, Leaflet.js maps

    folium builds on the data wrangling strengths of the Python ecosystem and the mapping strengths of the leaflet.js library. Manipulate your data in Python, then visualize it in on a Leaflet map via folium. folium makes it easy to visualize data that’s been manipulated in Python on an interactive leaflet map. It enables both the binding of data to a map for choropleth visualizations as well as passing rich vector/raster/HTML visualizations as markers on the map. The library has a number of...
    Downloads: 6 This Week
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  • 23
    FunSQL.jl

    FunSQL.jl

    Julia library for compositional construction of SQL queries

    FunSQL is a Julia library for the compositional construction of SQL queries. Julia programmers sometimes need to interrogate data with the Structured Query Language (SQL). But SQL is notoriously hard to write in a modular fashion. FunSQL exposes full expressive power of SQL with compositional semantics. FunSQL allows you to build queries incrementally from small independent fragments. This approach is particularly useful for building applications that programmatically construct SQL...
    Downloads: 5 This Week
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  • 24
    FileTrees.jl

    FileTrees.jl

    Parallel file processing made easy

    Easy everyday parallelism with a file tree abstraction. Read a directory structure as a Julia data structure, (lazy-)load the files, apply map and reduce operations on the data while not exceeding available memory if possible. Make up a file tree in memory, create some data to go with each file (in parallel), write the tree to disk (in parallel). FileTrees is a set of tools to lazy-load, process and save file trees. Built-in parallelism allows you to max out all threads and processes that...
    Downloads: 6 This Week
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  • 25
    CBinding.jl

    CBinding.jl

    Automatic C interfacing for Julia

    Use CBinding.jl to automatically create C library bindings with Julia at runtime. In order to support the fully automatic conversion and avoid name collisions, the names of C types or functions are mangled a bit to work in Julia. Therefore everything generated by CBinding.jl can be accessed with the c"..." string macro to indicate that it lives in C-land. As an example, the function func above is available in Julia as c"func". It is possible to store the generated bindings to more...
    Downloads: 5 This Week
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