Search Results for "note-taking" - Page 2
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Showing 49 open source projects for "note-taking"
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PyMOL Molecular Graphics System
PyMOL is an OpenGL based molecular visualization system
The Open-Source PyMOL repository has been moved to github: https://github.com/schrodinger/pymol-open-source We still use the pymol-users mailing list here on sourceforge. Please subscribe for community support: https://pymol.org/maillist (Note: SourceForge email newsletter and special offers are optional and can be unchecked) The PyMOL community wiki has its own home: https://pymolwiki.org/ -
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VividSTORM
Correlated confocal and SMLM data visualization and analysis
VividSTORM is a free and open-source standalone software with graphical user interface, for the correlated visualization and analysis of superresolution single molecule localization microscopy (SMLM) molecule lists and conventional pixel intensity-based images. The localization points (LPs) within this ROI can be analyzed using the selected built-in functions. NOTE: If you encounter issues not addressed by the user guide, please contact by message on this site or via e-mail for additional support: vividstorm[at]koki.mta.hu If you find our software useful in your project, please cite: Correlated confocal and super-resolution imaging by VividSTORM Nature Protocols 11, 163–183 (2016) doi:10.1038/nprot.2016.002 -
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DICOM Image Reader
A minimal Medical application to read and view DICOM (dcm) image file
Dicom Image Reader is opensource medical image viewer built with JavaScript, HTML5, NodeJS and Electron framework. It can load data in DICOM format (single image dcm) and provides standard tools for its manipulation such as contrast, zoom, drag, possibility to draw regions on top of the image and imaging filters such as threshold and sharpening. It is based DWV JavaScript opensource library. =============== Requirements: - Processor: Intel Pentium 4 processor or later that's SSE2... -
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NVD3
A reusable charting library written in d3.js
This project is an attempt to build re-usable charts and chart components for d3.js without taking away the power that d3.js gives you. This is a very young collection of components, with the goal of keeping these components very customizable, staying away from your standard cookie cutter solutions. Download d3.v3.js. This is the only required library for NVD3. Download the latest nv.d3.js (version 1.8.1). Get the development version, or minified production version. -
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Visualization of Protein-Ligand Graphs
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. -
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DataPlotter
Lightweight and portable 2D data plotting application
NOTE: New versions will no longer be uploaded to SourceForge - for the latest versions please visit https://github.com/KerryL/DataPlotter/releases/latest. -
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GWT Highcharts is a freely available open source library that provides an elegant and feature complete approach for including Highcharts and Highstock visualizations within a GWT application using pure Java code. Note: the source code for this project is now being maintained on GitHub here: https://github.com/squinn/gwt-highcharts
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Unofficial ParaView SDK
Unofficial ParaView Development Installation
The objective of this project is to provide the "ParaView Development Installation" packages that Kitware hasn't released since ParaView 3.8.1: http://www.paraview.org/files/v3.8/ For more details, please visit our wiki: https://sourceforge.net/p/unofficial-paraview-sdk/wiki Note: This project was moved from Google Code, where it was named "unofficial-paraview-dev-install". = License and Legal = This project is not endorsed by Kitware, the makers and owners of ParaView. License: http://www.paraview.org/paraview-license/ This project is brought to you by blueCAPE Lda: http://www.bluecape.com.pt/ -
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NOTE: developement of this project has moved to GitHub http://github.org/matthuska/biasviz/ BiasViz is a Java applet for visualization of amino acid bias in multiple sequence alignments.
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Cylindrical BLAST Viewer
Alignments in Rotating Cylinder / 3D
3D viewer which arranges BLAST hits and other bioinformatics-related alignments in a rotating, cylindrical display. Feedback appreciated. NOTE: requires Java3d installation. Superceded by Cylindrical Alignment App -
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NativeViewer
Visual Studio C++ OpenCV images visualizer
...However, installation process differs for versions 2012, 2010 and pre-2010. Check the quick start guide for details: https://sourceforge.net/p/nativeviewer/wiki/QuickStartGuide Note that if you have Visual Studio 2012 or later, I recommend using Image Watch extension from Microsoft: https://visualstudiogallery.msdn.microsoft.com/e682d542-7ef3-402c-b857-bbfba714f78d -
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Fltk_contour
2D and 3D contour and colour map of regular or scattered data
NOTE: This project was moved to: https://github.com/eetorres An easy scientific data visualization widget for the FLTK library. The widget is an OpenGL based contour visualizer for Linux, which allow you to built 2D and 3D graph of contour and colour map for a xy regular or scattered data set. There is a good example with the topographic data of Poland with 5902 data points to introduce yourself how to use it. -
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oTuner
9-Octave Chromatic Tuner
Free open source GPL instrument / musical chromatic tuner (like an electronic guitar tuner) for Windows, Windows Mobile, & Pocket PC. Displays name of note played & accurate indication of whether pitch is sharp, flat, or exact (relative to 440Hz A). -
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Evoker is a graphical tool for plotting genotype intensity data in order to assess quality of genotype calls. It implements a compact, binary format which allows rapid access to data, even with hundreds of thousands of observations. PLEASE NOTE: This source repository is no longer active. See the github link above for the latest version.
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Controversial ideas of Williamson, Margulis & others suggest speciation by hybridizing might be more common than originally thought. Taking this concept to the nth degree & assuming that indeed, speciation mostly occurs by hybridizing events, not the accumulation of mutations or genetic drift, here is a catalogueoflife2gedcom converter. It allows the tree of life to be displayed as a human genealogy tree with hybridizing events depicted as "marriages." The idea then is that mutation accrual & genetic drift are the determining factors for "species maturation," not speciation itself. ...
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This add-on for Tecplot 360 and Tecplot Focus adds key frame animation capability, including the ability to simultaneously animate time and streamtraces. Note that an improved version of this add-on is now included in the Tecplot distribution.
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FRIDA (flexible rapid interactive data analysis) is a generic program for manipulating, fitting, and plotting x,z,y data. It is primarily aimed at spectral analysis, especially in neutron scattering. Note: project has moved away from sf.net.
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Circuit Sandbox
Visually build and simulate boolean logic circuits
Visually build boolean logic circuits and then simulate their operation. Create custom components from user-designed circuits. Written in Java for cross-platform functionality. NOTE: This project has moved to Bitbucket at http://bitbucket.org/kwellwood/circuitsandbox -
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(Note: Code has moved to Simthetic project; go to http://sf.net/projects/simthetic now.) This program is a GUI for the communication system simulation library simthetic, developed by Institute of Telecommunication TU Hamburg-Harburg.
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Note: The color functionality in A'Hote has been merged into the Papyrus library. A'Hote is a C++ library for creating color schemes including complements, split complements, triadics, tetradics, analogous colors, monochromatic groups, et. al.
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NOTE - All project resources are now hosted at http://qgis.org. Quantum GIS (QGIS) is a Geographic Information System (GIS). QGIS supports common vector and raster formats, including Shapefiles, PostGIS, GRASS, GeoTiff, TIFF, JPG, and many more.
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bitHull is a Simple unstructured data store-and-share mechanism. It is part experimental graph-based task/note/idea management system and part data aggregator.
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JRVFSim (Jarvis) is a simulator of a fluid dynamics phenomenon known as radial viscous fingering. Its main feature consists of taking jordan curves and simulating their evolution subject to various parameters. Includes a partial API for numerical methods
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DISCONTINUED SimSimSim offers help for writing simulation-like programs, by taking care of mundane issues such as managing the display window, 3D rendering (X, OpenGL, etc), simulation control (start/stop), random number generation, settings, message l
