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BetaML.jl
Beta Machine Learning Toolkit
The Beta Machine Learning Toolkit is a package including many algorithms and utilities to implement machine learning workflows in Julia, Python, R and any other language with a Julia binding. All models are implemented entirely in Julia and are hosted in the repository itself (i.e. they are not wrapper to third-party models). If your favorite option or model is missing, you can try to implement it yourself and open a pull request to share it (see the section Contribute below) or request its... -
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HCubature.jl
Pure-Julia multidimensional h-adaptive integration
The HCubature module is a pure-Julia implementation of multidimensional "h-adaptive" integration. then hcubature(f, a, b) computes the integral, adaptively subdividing the integration volume into smaller and smaller pieces until convergence is achieved to the desired tolerance (specified by optional rtol and atol keyword arguments. Because hcubature is written purely in Julia, the integrand f(x) can return any vector-like object (technically, any type supporting +, -, * real, and norm: a... -
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ImplicitGlobalGrid.jl
Distributed parallelization of stencil-based GPU and CPU applications
ImplicitGlobalGrid is an outcome of a collaboration of the Swiss National Supercomputing Centre, ETH Zurich (Dr. Samuel Omlin) with Stanford University (Dr. Ludovic Räss) and the Swiss Geocomputing Centre (Prof. Yuri Podladchikov). It renders the distributed parallelization of stencil-based GPU and CPU applications on a regular staggered grid almost trivial and enables close to ideal weak scaling of real-world applications on thousands of GPUs [1, 2, 3]. ImplicitGlobalGrid relies on the... -
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SciML Style Guide for Julia
A style guide for stylish Julia developers
The SciML Style Guide is a style guide for the Julia programming language. It is used by the SciML Open Source Scientific Machine Learning Organization. As such, it is open to discussion with the community. If the standard for code contributions is that every PR needs to support every possible input type that anyone can think of, the barrier would be too high for newcomers. Instead, the principle is to be as correct as possible to begin with, and grow the generic support over time. All... -
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Luxor
Simple drawings using vector graphics; Cairo "for tourists!"
Luxor is a Julia package for drawing simple static 2D vector graphics. It provides basic drawing functions and utilities for working with shapes, polygons, clipping masks, PNG and SVG images, turtle graphics, and simple animations. The focus of Luxor is on simplicity and ease of use: it should be easier to use than plain Cairo.jl, with shorter names, fewer underscores, default contexts, and simplified functions. For more complex and sophisticated graphics in 2D and 3D, Makie.jl is the best... -
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BertViz
BertViz: Visualize Attention in NLP Models (BERT, GPT2, BART, etc.)
BertViz is an interactive tool for visualizing attention in Transformer language models such as BERT, GPT2, or T5. It can be run inside a Jupyter or Colab notebook through a simple Python API that supports most Huggingface models. BertViz extends the Tensor2Tensor visualization tool by Llion Jones, providing multiple views that each offer a unique lens into the attention mechanism. The head view visualizes attention for one or more attention heads in the same layer. It is based on the... -
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gganimate
A Grammar of Animated Graphics
gganimate extends the grammar of graphics as implemented by ggplot2 to include the description of animation. It does this by providing a range of new grammar classes that can be added to the plot object in order to customize how it should change with time. Here we take a simple boxplot of fuel consumption as a function of cylinders and let it transition between the number of gears available in the cars. As this is a discrete split (gear being best described as an ordered factor) we use... -
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Sweetviz
Visualize and compare datasets, target values and associations
Sweetviz is an open-source Python library that generates beautiful, high-density visualizations to kickstart EDA (Exploratory Data Analysis) with just two lines of code. Output is a fully self-contained HTML application. The system is built around quickly visualizing target values and comparing datasets. Its goal is to help quick analysis of target characteristics, training vs testing data, and other such data characterization tasks. Shows how a target value (e.g. "Survived" in the Titanic... -
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Semiotic
A data visualization framework combining React & D3
Semiotic is a data visualization framework combining React & D3. It provides three types of frames XYFrame, OrdinalFrame, NetworkFrame, to deploy a wide variety of charts. XY data i.e. line charts and scatterplots. Categorical data i.e. bar charts, violin plots, parallel coordinates. Topological and network data i.e. flow diagrams, network visualization, and hierarchical views. A guide for creating a line chart, timeseries, difference line, and line percents using XYFrame along with hover... -
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city-roads
Visualization of all roads within any city
city-roads is a data visualization and mapping project that renders street networks of cities as vector paths, offering an interactive, zoomable experience that highlights how cities are stitched together by their road infrastructure. It typically fetches open map data (such as from OpenStreetMap) and then processes that data into geometry suited for rendering in the browser, allowing users to explore intricate road layouts at various scales. The visual style often abstracts away labels and... -
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pprof
pprof is a tool for visualization and analysis of profiling data
pprof is a profiling visualization and analysis tool that ingests profiles in the profile.proto format and generates human-readable and graph-based reports. It supports multiple profile types (CPU, heap, allocations, contention, etc.) and can present data as text tables, call graphs (via Graphviz/dot), flame graphs, and interactive web UIs. The tool helps developers find hot paths, quantify resource usage, and compare profiles across runs to validate performance changes. It is widely used in... -
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see
Visualisation toolbox for beautiful and publication-ready figures
see is an R package that serves as the visualization component of the easystats ecosystem, providing plotting utilities to produce publication-ready visualizations of statistical model parameters, diagnostics, predictions, and performance metrics. It works in conjunction with other easystats packages (such as parameters, performance, modelbased, bayestestR, etc.) to convert model outputs or summary objects into visual forms (dot-and-whisker plots, diagnostic plots, residual plots, etc.). It... -
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ggrepel
epel overlapping text labels away from each other in your ggplot2
ggrepel is an R package that provides “smart” repulsion for text and label geoms in ggplot2. When placing text labels on a plot (e.g. labeling points), the labels can often overlap; ggrepel ensures labels don’t overlap (or overlap less) by repelling labels / pushing them away, adding connecting lines or nudges, etc. It improves the readability of plots, especially when many labels are present. Support for point and segment geoms (so labels can be connected by lines when moved). Supports both... -
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Chromatone
Chromatone is a digital garden of visual music theory
Cards and short overviews on the physics and physiology of vision and hearing and their intersection at visual music research, exploration, practice, and self-expression. Useful tools to have in the pocket like a pack of interactive cards to learn and use in everyday music practice. These are open source web experiments with different aspects of sound and color. Chromatone is an open source research and design project to explore, develop and implement the scientific way of visual music... -
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nb-clean
Clean Jupyter notebooks of outputs, metadata, and empty cells
nb-clean cleans Jupyter notebooks of cell execution counts, metadata, outputs, and (optionally) empty cells, preparing them for committing to version control. It provides both a Git filter and pre-commit hook to automatically clean notebooks before they're staged, and can also be used with other version control systems, as a command line tool, and as a Python library. It can determine if a notebook is clean or not, which can be used as a check in your continuous integration pipelines.... -
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WordCloud.jl
Word cloud generator in julia
Word cloud (tag cloud or wordle) is a novelty visual representation of text data. The importance of each word is shown with its font size, position, or color. WordCloud.jl is the perfect tool for generating word clouds, offering several advantages. You have control over every aspect of generating a word cloud. You can customize the shape, color, angle, position, distribution, density, and spacing to align with your preferences and artistic style. This visualization solution guarantees... -
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NonlinearSolve.jl
High-performance and differentiation-enabled nonlinear solvers
Fast implementations of root-finding algorithms in Julia that satisfy the SciML common interface. For information on using the package, see the stable documentation. Use the in-development documentation for the version of the documentation that contains the unreleased features. NonlinearSolve.jl is a unified interface for the nonlinear solving packages of Julia. The package includes its own high-performance nonlinear solvers which include the ability to swap out to fast direct and iterative... -
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ParallelStencil.jl
Package for writing high-level code for parallel stencil computations
ParallelStencil empowers domain scientists to write architecture-agnostic high-level code for parallel high-performance stencil computations on GPUs and CPUs. Performance similar to CUDA C / HIP can be achieved, which is typically a large improvement over the performance reached when using only CUDA.jl or AMDGPU.jl GPU Array programming. For example, a 2-D shallow ice solver presented at JuliaCon 2020 [1] achieved a nearly 20 times better performance than a corresponding GPU Array... -
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ReinforcementLearning.jl
A reinforcement learning package for Julia
A collection of tools for doing reinforcement learning research in Julia. Provide elaborately designed components and interfaces to help users implement new algorithms. Make it easy for new users to run benchmark experiments, compare different algorithms, and evaluate and diagnose agents. Facilitate reproducibility from traditional tabular methods to modern deep reinforcement learning algorithms. Make it easy for new users to run benchmark experiments, compare different algorithms, and... -
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Go Recipes
Collection of handy tools for Go projects
Visualize the distribution of code coverage in your project. This helps to identify code areas with high and low coverage. Useful when you have a large project with lots of files and packages. This 2D image-hash of your project should be more representative than a single number. For each module, the node representing the greatest version (i.e., the version chosen by Go's minimal version selection algorithm) is colored green. Other nodes, which aren't in the final build list, are colored grey... -
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plotly
An interactive graphing library for R
This part of the book teaches you how to leverage the plotly R package to create a variety of interactive graphics. There are two main ways to creating a plotly object: either by transforming a ggplot2 object (via ggplotly()) into a plotly object or by directly initializing a plotly object with plot_ly()/plot_geo()/plot_mapbox(). Both approaches have somewhat complementary strengths and weaknesses, so it can pay off to learn both approaches. Moreover, both approaches are an implementation of... -
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brms
brms R package for Bayesian generalized multivariate models using Stan
brms is an R package by Paul Bürkner which provides a high-level interface for fitting Bayesian multilevel (i.e. mixed effects) models, generalized linear / non-linear / multivariate models using Stan as the backend. It allows R users to specify complex Bayesian models using formula syntax similar to lme4 but with far more flexibility (distributions, link functions, hierarchical structure, nonlinear terms, etc.). It supports model diagnostics, posterior predictive checking, model comparison,... -
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TIGRE
TIGRE: Tomographic Iterative GPU-based Reconstruction Toolbox
TIGRE is an open-source toolbox for fast and accurate 3D tomographic reconstruction for any geometry. Its focus is on iterative algorithms for improved image quality that have all been optimized to run on GPUs (including multi-GPUs) for improved speed. It combines the higher-level abstraction of MATLAB or Python with the performance of CUDA at a lower level in order to make it both fast and easy to use. TIGRE is free to download and distribute: use it, modify it, add to it, and share it. Our... -
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Catalyst.jl
Chemical reaction network and systems biology interface
Catalyst.jl is a symbolic modeling package for analysis and high-performance simulation of chemical reaction networks. Catalyst defines symbolic ReactionSystems, which can be created programmatically or easily specified using Catalyst's domain-specific language (DSL). Leveraging ModelingToolkit and Symbolics.jl, Catalyst enables large-scale simulations through auto-vectorization and parallelism. Symbolic ReactionSystems can be used to generate ModelingToolkit-based models, allowing the easy... -
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GoJS
JavaScript diagramming library for interactive flowcharts & org charts
Build interactive flowcharts or flow diagrams. Let your users build, modify, and save diagrams with JSON model output. Visualize state charts and other behavior diagrams. Create diagrams with live updates to monitor state, or interactive diagrams for planning. GoJS allows considerable customization of links and nodes to build all kinds of diagrams. Visualize flow, or connect pipes. Create genogram and medical diagrams, or editable family trees with collapsible levels. Create classic org...
