Search Results for "bcftools-windows"
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Showing 278 open source projects for "bcftools-windows"
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99.99% Uptime for MySQL and PostgreSQL DatabasesCloud SQL Enterprise Plus delivers near-zero downtime with 35 days of point-in-time recovery. Supports MySQL, PostgreSQL, and SQL Server.
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Build Securely on AWS with Proven FrameworksMoving to the cloud brings new challenges. How can you manage a larger attack surface while ensuring great network performance? Turn to Fortinet’s Tested Reference Architectures, blueprints for designing and securing cloud environments built by cybersecurity experts. Learn more and explore use cases in this white paper.
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Orange Data Mining
Orange: Interactive data analysis
Open source machine learning and data visualization. Build data analysis workflows visually, with a large, diverse toolbox. Perform simple data analysis with clever data visualization. Explore statistical distributions, box plots and scatter plots, or dive deeper with decision trees, hierarchical clustering, heatmaps, MDS and linear projections. Even your multidimensional data can become sensible in 2D, especially with clever attribute ranking and selections. Interactive data exploration for... -
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Matplotlib
matplotlib: plotting with Python
Matplotlib is a comprehensive library for creating static, animated, and interactive visualizations in Python. Matplotlib makes easy things easy and hard things possible. Matplotlib ships with several add-on toolkits, including 3D plotting with mplot3d, axes helpers in axes_grid1 and axis helpers in axisartist. A large number of third party packages extend and build on Matplotlib functionality, including several higher-level plotting interfaces (seaborn, HoloViews, ggplot, ...), and a... -
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pydna
Clone with Python! Data structures for double stranded DNA
Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning. Planning genetic constructs with many parts and assembly steps, such as recombinant metabolic pathways, are often difficult to properly document as is evident from the poor state of documentation in the scientific literature. The pydna python package provide a human-readable formal description of cloning and genetic assembly strategies in Python which... -
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Kale
Kubeflow’s superfood for Data Scientists
KALE (Kubeflow Automated pipeLines Engine) is a project that aims at simplifying the Data Science experience of deploying Kubeflow Pipelines workflows. Kubeflow is a great platform for orchestrating complex workflows on top Kubernetes and Kubeflow Pipeline provides the mean to create reusable components that can be executed as part of workflows. The self-service nature of Kubeflow make it extremely appealing for Data Science use, at it provides an easy access to advanced distributed jobs... -
Build Data Resilience - Take the Assessment TodayIs your recovery strategy as strong as you think? Take this quick self-assessment to check your recovery readiness and gain tailored insights. In only 2 minutes, you'll learn where you fall on the recovery readiness scale.
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geemap
A Python package for interactive geospaital analysis and visualization
A Python package for interactive geospatial analysis and visualization with Google Earth Engine. Geemap is a Python package for geospatial analysis and visualization with Google Earth Engine (GEE), which is a cloud computing platform with a multi-petabyte catalog of satellite imagery and geospatial datasets. During the past few years, GEE has become very popular in the geospatial community and it has empowered numerous environmental applications at local, regional, and global scales. GEE... -
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atpbar
Progress bars for threading and multiprocessing tasks on terminal
Progress bars for threading and multiprocessing tasks on the terminal and Jupyter Notebook. atpbar can display multiple progress bars simultaneously growing to show the progresses of iterations of loops in threading or multiprocessing tasks. atpbar can display progress bars on the terminal and Jupyter Notebook. atpbar can be used with Mantichora. atpbar started its development in 2015 as part of Alphatwirl. atpbar prevented physicists from terminating their running analysis codes, which... -
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leafmap
A Python package for interactive mapping and geospatial analysis
A Python package for geospatial analysis and interactive mapping in a Jupyter environment. Leafmap is a Python package for interactive mapping and geospatial analysis with minimal coding in a Jupyter environment. It is a spin-off project of the geemap Python package, which was designed specifically to work with Google Earth Engine (GEE). However, not everyone in the geospatial community has access to the GEE cloud computing platform. Leafmap is designed to fill this gap for non-GEE users. It... -
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miepython
Mie scattering of light by perfect spheres
miepython is a pure Python module to calculate light scattering for non-absorbing, partially-absorbing, or perfectly-conducting spheres. Mie theory is used, following the procedure described by Wiscombe. This code has been validated against his results. This code provides functions for calculating the extinction efficiency, scattering efficiency, backscattering, and scattering asymmetry. Moreover, a set of angles can be given to calculate the scattering for a sphere at each of those angles. -
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GemGIS
Spatial data processing for geomodeling
GemGIS is a Python-based, open-source geographic information processing library. It is capable of preprocessing spatial data such as vector data (shape files, geojson files, geopackages,…), raster data (tif, png,…), data obtained from online services (WCS, WMS, WFS) or XML/KML files (soon). Preprocessed data can be stored in a dedicated Data Class to be passed to the geomodeling package GemPy in order to accelerate the model-building process. Postprocessing of model results will allow export... -
PRTG Catches Network Issues Before They Cause DowntimeReactive troubleshooting usually means hearing about a problem from frustrated users, not your monitoring tool. PRTG sets threshold-based alerts across devices, servers and applications, notifying your team by email, SMS or push the moment a metric crosses a set limit. That means catching a failing disk or overloaded server before it becomes an outage and getting time back from firefighting. Start a free trial and set your first alerts today.
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folium
Python data, Leaflet.js maps
folium builds on the data wrangling strengths of the Python ecosystem and the mapping strengths of the leaflet.js library. Manipulate your data in Python, then visualize it in on a Leaflet map via folium. folium makes it easy to visualize data that’s been manipulated in Python on an interactive leaflet map. It enables both the binding of data to a map for choropleth visualizations as well as passing rich vector/raster/HTML visualizations as markers on the map. The library has a number of... -
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Bayesian Optimization
Python implementation of global optimization with gaussian processes
This is a constrained global optimization package built upon bayesian inference and gaussian process, that attempts to find the maximum value of an unknown function in as few iterations as possible. This technique is particularly suited for optimization of high cost functions, situations where the balance between exploration and exploitation is important. More detailed information, other advanced features, and tips on usage/implementation can be found in the examples folder. Follow the basic... -
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PyVista
3D plotting and mesh analysis through a streamlined interface
3D plotting and mesh analysis through a streamlined interface for the Visualization Toolkit (VTK). PyVista is a helper module for the Visualization Toolkit (VTK) that takes a different approach on interfacing with VTK through NumPy and direct array access. This package provides a Pythonic, well-documented interface exposing VTK’s powerful visualization backend to facilitate rapid prototyping, analysis, and visual integration of spatially referenced datasets. This module can be used for... -
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Mercury
Convert Python notebook to web app and share with non-technical users
Turn Python notebooks to web applications with open-source Mercury framework. Hide code and add interactive widgets. Non-technical users can tweak widgets and execute notebook with new parameters. The core of Mercury is Open Source under AGPLv3. We provide Mercury Pro with additional features, dedicated support and friendly commercial license. Mercury is a perfect tool to convert Python notebook to interactive web application and share with non-programmers. You define interactive widgets for... -
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PySR
High-Performance Symbolic Regression in Python and Julia
PySR is an open-source tool for Symbolic Regression: a machine learning task where the goal is to find an interpretable symbolic expression that optimizes some objective. Over a period of several years, PySR has been engineered from the ground up to be (1) as high-performance as possible, (2) as configurable as possible, and (3) easy to use. PySR is developed alongside the Julia library SymbolicRegression.jl, which forms the powerful search engine of PySR. The details of these algorithms are... -
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electricityMap
A real-time visualisation of the CO2 emissions of electricity
Real-time visualization of the Greenhouse Gas (in terms of CO2 equivalent) footprint of electricity consumption built with d3.js and mapbox GL. Real-time data is defined as a data source with an hourly (or better) frequency, delayed by less than 2hrs. It should provide a breakdown by generation type. Often fossil fuel generation (coal/gas/oil) is combined under a single heading like 'thermal' or 'conventional', this is not a problem. Citizens should not be responsible for the emissions... -
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HyperTools
A Python toolbox for gaining geometric insights
HyperTools is a library for visualizing and manipulating high-dimensional data in Python. It is built on top of matplotlib (for plotting), seaborn (for plot styling), and scikit-learn (for data manipulation). Functions for plotting high-dimensional datasets in 2/3D. Static and animated plots. Simple API for customizing plot styles. Set of powerful data manipulation tools including hyperalignment, k-means clustering, normalizing and more. Support for lists of Numpy arrays, Pandas dataframes,... -
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JILL.py
A cross-platform installer for the Julia programming language
The enhanced Python fork of JILL, Julia Installer for Linux (and every other platform), Light. -
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Neuroglancer
WebGL-based viewer for volumetric data
Neuroglancer is a WebGL-based visualization tool designed for exploring large-scale volumetric and neuroimaging datasets directly in the browser. It allows users to interactively view arbitrary 2D and 3D cross-sections of volumetric data alongside 3D meshes and skeleton models, enabling precise examination of neural structures and biological imaging results. Its multi-pane interface synchronizes multiple orthogonal views with a central 3D viewport, making it ideal for analyzing complex brain... -
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Run Page
Make your own running home page
GitHub Actions manages automatic synchronization of runs and generation of new pages. Gatsby-generated static pages, fast. Support for Vercel (recommended) and GitHub Pages automated deployment. React Hooks. Mapbox for map display. Supports most sports apps such as nike strava. Automatically backup gpx data for easy backup and uploading to other software. -
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classic.tplx
A more accurate representation of jupyter notebooks
A more accurate representation of Jupyter notebooks when converting to pdfs. This template was designed to make converted Jupyter notebooks look (almost) identical to the actual notebook. If something doesn't exist in the original notebook then it doesn't belong in the conversion. As of nbconvert 5.5.0, the majority of these improvements have been merged into nbconvert's default template. Version 3.x of this package will continue to support nbconvert 5.5.0 and lower, whereas in the future... -
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InstaGraph
Converts text input or URL into knowledge graph and displays
InstaGraph is a Flask application that converts text input or a URL into a visual knowledge graph. It uses an LLM to identify entities, relationships, labels, and node types from the provided content. The generated graph is displayed visually, helping users understand relationships that may be harder to see in plain text. The project includes Graphviz-based visualization logic and supports updating an existing graph through follow-up instructions. It is designed to be simple, colorful, and... -
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VisPy
Main repository for Vispy
Vispy is an open-source, high-performance interactive visualization library in Python, designed for creating scientific visualizations and interactive plots. It leverages the power of modern Graphics Processing Units (GPUs) through OpenGL to render large datasets efficiently. Vispy supports a wide range of visualization types, including 2D plots, 3D visualizations, volume rendering, and more, making it suitable for scientific research, data analysis, and educational purposes. -
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Visdom
A tool for creating, organizing, and sharing data visualizations
...Visdom has a simple set of features that can be composed for various use-cases. The UI begins as a blank slate, you can populate it with plots, images, and text. These appear in windows that you can drag, drop, resize, and destroy. The windows live in envs and the state of envs is stored across sessions. You can download the content of windows, including your plots in svg. -
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Blueprint MCP
Diagram generation for understanding codebases and system architecture
Blueprint MCP is a modular control plane designed for managing and orchestrating multiple game-server clusters in real time, giving operators fine-grained control over scaling, configuration, and deployment workflows across distributed infrastructure. It provides a central management REST API and dashboard where teams can view cluster health, adjust instance fleets, set auto-scaling policies, and monitor usage metrics in a unified interface. Blueprint-MCP also supports templated server... -
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BertViz
BertViz: Visualize Attention in NLP Models (BERT, GPT2, BART, etc.)
BertViz is an interactive tool for visualizing attention in Transformer language models such as BERT, GPT2, or T5. It can be run inside a Jupyter or Colab notebook through a simple Python API that supports most Huggingface models. BertViz extends the Tensor2Tensor visualization tool by Llion Jones, providing multiple views that each offer a unique lens into the attention mechanism. The head view visualizes attention for one or more attention heads in the same layer. It is based on the...
