Search Results for "tool" - Page 5
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Showing 265 open source projects for "tool"
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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AI-powered service management for IT and enterprise teamsGive your IT, operations, and business teams the ability to deliver exceptional services—without the complexity. Maximize operational efficiency with refreshingly simple, AI-powered Freshservice.
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Workbench for visualizing biological networks (regulatory, interaction, and metabolic). Can be used as a front-end for BNDB datawarehouses, but also as stand-alone tool.
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Kity Minder
Baidu brain map
KityMinder is another masterpiece of the f-cube group (formerly the UEditor group) of the Baidu FEX team. As an online brain map editing tool, it has an interactive experience no less than the native brain map tool. At the same time, it gives full play to the advantages of web cloud storage, and can directly synchronize the edited brain map to the cloud. In addition, with the original "cloud disk sharing" function, users can directly generate an online link from the currently edited brain map with one click and share it with other users to achieve seamless communication. ... -
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CViT - Chromosome Viewing Tool. A collection of Perl scripts that enable quick visualizations of features on linkage groups, psuedochromosomes or cytogenetic maps. Intended for whole-genome views of data but can be used to create images of single chromosomes/linkage groups, contigs, or BACs, or even proteins -- any feature that has a location on a backbone. Handles most standard genetic/genomic coordinate systems.
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SyntheticWSI
Tools to generate and visualize artificial whole slide images
Java 8+ required. Collection of tools to help generate artificial Whole Slide Images (WSIs). A WSI is stored as a ZIP archive of JPG tiles, and this software contains a tool to visualize this format. SVS files can be used directly for texture extraction (thanks to the included Bio-Formats library). Main source files in package fr.unistra.wsi.synthetic. -
Gemini 3 and 200+ AI Models on One PlatformBuild generative AI apps with Vertex AI. Switch between models without switching platforms.
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An extensible, real-time, 3D visualization, simulation, and game-design authoring tool. Integrates Java 3D and Eclipse RCP. Drag-&-Drop editing of a complex 3D scene graph. Fast world-building. Web delivery via Webstart or Applets.
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Xmind
The most popular mindmapping and brainstorming software
Professional and powerful brainstorming and mind mapping software tool, open source, Eclipse Community Award winner, often used for capture ideas, knowledge/project management and GTD, supporting fishbones/org-charts/tree charts/spreadsheets, easy-to-use. -
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HomSI
Homozygous Stretch Identifier from next-generation sequencing data
...Recently, the advent of next generation sequencing enables the concurrent identification of homozygous regions and the detection of mutations relevant for diagnosis, using data from a single sequencing experiment. In this respect, we have developed a novel tool that identifies homozygous regions using deep sequence data. Using *.vcf files as an input file, our program identifies the majo -
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Ezys
Ezys 3D medical image registration program
...Ezys implements a diffeomorphic inverse consistent image registration algorithm with a demons-style regularization based on a non-parametric free form deformation model. Mutual Information and Normalized Mutual Information cost functions make Ezys a perfect tool for an inter-modal image registration. -
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COV2HTML
A visualization and analysis tool of Bacterial NGS data for Biologists
COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS mapping coverage data (DNA-seq, RNA-seq, ChIP-seq and TSS) performed in different prokaryotic organisms (bacteria, viruses...) or different experimental conditions (mutant versus wild type strains or different growth states…) facilitating studies. -
AI-generated apps that pass security reviewRetool lets you generate dashboards, admin panels, and workflows directly on your data. Type something like “Build me a revenue dashboard on my Stripe data” and get a working app with security, permissions, and compliance built in from day one. Whether on our cloud or self-hosted, create the internal software your team needs without compromising enterprise standards or control.
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NanoCap
Carbon Fullerene and Capped Nanotube Generator
NanoCap is a generic application for the construction of low energy fullerene and capped nanotube structures. It provides an ideal tool to accompany the study of finite carbon molecules using computer simulation. The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the structure generation routines into pre-existing code. -
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XNBC: neurobiology simulation tool
XNBC is a graphic application to simulate biologic neural networks.
XNBC is a full featured application for computer naive neuroscientists. It simulates biological neural networks using graphic tools to edit neurons and networks, to run the simulation and to analyze results. Written in C, it runs on Unix and Windows. Web site : http://ticemed-sa.upmc.fr/xnbc/ All recent versions are on this site. -
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CIG-P
CIG-P is a simple yet flexible data visualization tool
...Publication: CIG-P: Cicular Interaction Graph for Proteomics http://www.biomedcentral.com/1471-2105/15/344/ Previously known as PIVOT (Protein Interaction Visualization and Observation Tool) -
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Graphical Grammar Studio
An user friendly grammar tool for natural language processing tasks
Full documentation with tutorials is included in the download package. Graphical Grammar Studio is a tool for applying grammars which behave as words acceptors/consumers and annotators. GGS grammars can be used to find and annotate sequences of words which respect certain conditions, in a given input. Its purpose is for creating NLP tools like phrase chunkers, named entity finders, pronoun co-reference solvers etc. A grammar is represented by a state machine which can be visualized, edited and applied. ... -
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Scenario Editor And Visualizer
Scenario Editing and Visualization tool for Scientific scenes
...With reduced costs and processing power available and availability of experimentation platforms could hold the key to an enchanting learning experience. The first step is an editing and visualization tool. Described in paper http://ieeexplore.ieee.org/xpl/articleDetails.jsp?tp=&arnumber=6629931&refinements%3D4278371973%26queryText%3DGlobal+Humanitarian+Technology+Conference%3A+South+Asia+Satellite+.LB.GHTC-SAS.RB.%2C+2013+IEEE#! -
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Nuclei
Feature rich GUI for nuclear decay schemes
Nuclei is a software tool for the displaying of nuclear decay schemes and estimated energy spectra, the calculation of angular γ emission anisotropies, and the automated search for appropriate decay cascade properties. It uses the Evaluated Nuclear Structure Data Files (ENSDF). A description of Nuclei's functionality and results obtained using its search method was published in Nuclear Instruments and Methods in Physics Research, Section A: M. -
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IMPORTANT NOTICE: This project has moved to GitHub: https://github.com/sarahtattersall/PIPE Releases will be posted here, but please check on GitHub for the most recent activity. Create, model and analyse Petri nets with a standards-compliant Petri net tool. PIPE2 is the active fork of the Platform Independent Petri net Editor project, which originated at Imperial College London.
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WaveSorter
A powerful, versatile tool for offilne spike analysis and sorting
WaveSorter emphasizes dynamic visualization and versatility. Slider controls let the user select any coefficient or sample from any of several transforms, which can then be plotted to either axis of a 2D histogram (scatterplot). Within the waveform space, cursor-based controls let the user select subregions of the waveform space or individual waveforms to view. The user may cluster waveforms manually or via one of several popular clustering programs. The classification along with waveform... -
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hyperforms
Hyperforms is a visualisation tool for multi-dimensional objects and f
hyperforms is a visualisation tool for multi-dimensional objects and forms. They are projected into a 3D-Space by different methods of Projection. Currently a cell-first projection is implemented. Hyperforms aims at architectural experiments to create computer driven designs. --- The Project is in Research and not ready to use. --- -
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Dynagraph is a cross-platform library and command-line tool for dynamically drawing graphs (networks, flowcharts, family trees, etc.) in reponse to continual modifications. Included are DynaDAG for directed graphs and FDP force-directed placement.
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PIVOT
PIVOT is a simple yet flexible visualization data tool
PIVOT is a simple yet flexible visualization tool based on Circos (Krzywinski et al., 2009), which offers a fast and aesthetical visualization of data and information. The Protein Interaction Visualization and Observation Tool (PIVOT) was developed specifically for the visualization of protein interaction. It is difficult to spot the proteins that have an interaction when given a large list of proteins but with PIVOT, it is easy to identify the them at a glance. -
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flNeuronTool
A Fast Light Neuron Tracing and Editor Tool
...The system incorporates automatic tracing and manual editing of neuron reconstruction into a cooperative 3D interactive visualization-assisted environment, which is a powerful tool for analysis of complex neuronal images. -
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charterix
Web based Chart calculation Tool
Calculate and create Charts Web based with real PHP Code and its Math Functions. Develope in Groups with detailed User Permissions or alone, for study purposes or just for fun. Score good Charterix Projects to bring them under the top ten. A Test-Run is available here: http://charterix.sourceforge.net -
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ValiTerms
Validation of terms in corpus
ValiTerms is a tool that helps the validation of terms in corpus. It finds their occurrences and allows terminologists to choose if a term is relevant or not. ValiTerms is developed at LIPN (http://www-lipn.univ-paris13.fr), RCLN team. Please consult the wiki for instructions about installation and usage. -
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Panini is a visual tool for creating perspective views from panoramic and wide angle photographs. More than a pano viewer, more than a view camera, with features of both. For Linux/Unix, Win32, and Mac systems with OpenGL 2.0 + Nov. 2017: now hosted at https://github.com/lazarus-pkgs/panini
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The FAKE GAME tool uses natural evolution to evolve Data Mining models. It incorporates several preprocessing, optimization and visualization methods aimed to streamline the Knowledge Discovery process. Knowledge Extraction from data is being automated!
