Showing 229 open source projects for "file"

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  • 1
    Scaffold Hunter
    Scaffold Hunter is a JAVA-based software tool for the analysis of structure-related biochemical data. It enables generation of and navigation in a scaffold tree hierarchy annotated with various data.
    Downloads: 3 This Week
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  • 2
    Remotery

    Remotery

    Single C file, Realtime CPU/GPU Profiler with Remote Web Viewer

    Remotery is a real-time CPU/GPU profiler implemented as a single C file, providing developers with immediate insights into the performance of their applications. It features a remote web-based viewer that runs in browsers like Chrome, Firefox, and Safari, allowing for cross-platform performance analysis. Remotery supports profiling multiple threads and GPU contexts, offering a comprehensive view of an application's performance characteristics.
    Downloads: 0 This Week
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  • 3
    XELFViewer

    XELFViewer

    ELF file viewer/editor for Windows, Linux and MacOS

    ...It provides a cross-platform environment for inspecting binaries commonly used on Linux and other Unix-like systems. The tool is intended for reverse engineering, binary research, and low-level software analysis rather than ordinary file browsing. Users can examine ELF structures and navigate the data contained inside 32-bit and 64-bit binaries. Its architecture shares components with a larger suite of hexadecimal, disassembly, format-parsing, and analysis utilities. The project includes source and build workflows for Windows, Linux, and macOS. This makes ELF inspection available from multiple operating systems without requiring the analyzed executable to run on the host platform.
    Downloads: 11 This Week
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  • 4
    WAV.jl

    WAV.jl

    Julia package for working with WAV files

    This is a Julia package to read and write the WAV audio file format. WAV provides wavread, wavwrite and wavappend functions to read, write, and append to WAV files. The function wavplay provides simple audio playback. These functions behave similarly to the former MATLAB functions of the same name.
    Downloads: 0 This Week
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  • 5
    Jupyter Dock

    Jupyter Dock

    Perform molecular docking protocols interactively

    Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results. These notebooks are Python 3 compatible. Each protocol and Jupyter notebook has its own test folder for testing and reproducibility evaluation. For all notebooks, the demonstration includes the use of AutoDock Vina and Ledock. When available, some alternatives are mentioned in the protocol. Jupyter Dock's initial goal was to provide a set of pythonic protocols for molecular docking. ...
    Downloads: 0 This Week
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  • 6

    pydatascope

    Software oscilloscope using Python and tkinter

    Software oscilloscope using Python and tkinter. Supports multiple sources: socket, file, audio, USB. Displays data by samples, time or frequency. Scales the input automatically or manually.
    Downloads: 0 This Week
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  • 7
    DynaQ

    DynaQ

    Innovative text document search. http://dynaq.opendfki.de for details.

    The goal of DynaQ is to develop an inquiry system to explore the personal information space, supporting you with the searching paradigm 'orienteering'. DynaQ is a (desktop)search engine with enhanced functionality for file, email and blog search. Look at our GitLab homepage for sourcecode and documentation: http://dynaq.opendfki.de
    Downloads: 0 This Week
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  • 8
    RigidBodyDynamics.jl

    RigidBodyDynamics.jl

    Julia implementation of various rigid body dynamics

    RigidBodyDynamics.jl is a rigid body dynamics library in pure Julia. It aims to be user friendly and performant, but also generic in the sense that the algorithms can be called with inputs of any (suitable) scalar types. This means that if fast numeric dynamics evaluations are required, a user can supply Float64 or Float32 inputs. However, if symbolic quantities are desired for analysis purposes, they can be obtained by calling the algorithms with e.g. SymPy.Sym inputs. If gradients are...
    Downloads: 0 This Week
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  • 9
    libPGF

    libPGF

    libPGF is an implementation of the Progressive Graphics File (PGF)

    The Progressive Graphics File (PGF) is an efficient image file format, that is based on a fast, discrete wavelet transform with progressive coding features. PGF can be used for lossless and lossy compression. It's most suitable for natural images. PGF can be used as a very efficient and fast replacement of JPEG 2000.
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    Downloads: 42 This Week
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  • 10
    pycoQC

    pycoQC

    pycoQC computes metrics and generates Interactive QC plots

    PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing data. PycoQC relies on the sequencing_summary.txt file generated by Albacore and Guppy, but if needed it can also generate a summary file from basecalled fast5 files. The package supports 1D and 1D2 runs generated with Minion, Gridion and Promethion devices and basecalled with Albacore 1.2.1+ or Guppy 2.1.3+. PycoQC is written in pure Python3. Python 2 is not supported.
    Downloads: 0 This Week
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  • 11
    Limada
    Limada (Linked Marked Data) is a framework for managing relationships of data in non-hierarchical structures, where the individual elements are interconnected in complex ways. The philosophy behind: Information is connection, is relationship of data.
    Downloads: 0 This Week
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  • 12
    IPyPublish

    IPyPublish

    Workflow for creating and editing publication ready scientific reports

    A program for creating and editing publication-ready scientific reports and presentations, from one or more Jupyter Notebooks. Dynamically (and reproducibly) explore data, run code, and output the results. Dynamically edit and visualize the basic components of the document (text, math, figures, tables, references, citations, etc). Have precise control over what elements are output to the final document and how they are layed out and typeset. Also be able to output the same source document to...
    Downloads: 0 This Week
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  • 13
    NOVA

    NOVA

    Analysis and visualization of complexome profiling data.

    ...Several hierarchical clustering algorithms (e.g., single linkage, average linkage, Wards linkage), different distance measures (e.g., Euclidean distance, Manhattan distance, Pearson distance), and various normalization techniques are implemented. Many additional functions like zooming, searching for proteins, image export, and automatic file format recognition support intuitive handling for biologists. Giese, et al. NOVA: a software to analyze complexome profiling data. Bioinformatics, 2015, 31(3): 440-441
    Downloads: 4 This Week
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  • 14
    QuteScoop
    QuteScoop is a platform-independent status indicator for VATSIM. It's available for Windows, Mac and Linux. Visit its new development location https://github.com/qutescoop/qutescoop for current downloads and source code.
    Downloads: 1 This Week
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  • 15
    tikzcd-editor

    tikzcd-editor

    A simple visual editor for creating commutative diagrams

    A simple visual editor for creating commutative diagrams.
    Downloads: 0 This Week
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  • 16
    graphdot

    graphdot

    Visualize Go module dependencies in Graphviz DOT format

    Visualize Go module dependencies in Graphviz DOT format. Run graphdot in the directory of any project using Go modules with a go.mod file to print out a dependency graph in Graphviz DOT format. The output can be piped directly into dot to generate a PNG image file. For large graphs with many nodes of dependencies, you may want to generate an SVG file to allow you to zoom in with high fidelity and save disk space instead. If you like a more UML'ish style, you can use the provided graph properties from uml.gprops.
    Downloads: 0 This Week
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  • 17
    Immerse.jl

    Immerse.jl

    Dive deeper into your data with interactive graphics

    ...Immerse is a wrapper that adds graphical interactivity to Julia's plots. Currently, Immerse supports Gadfly. The toolbar at the top supports saving your figure to a file, zooming and panning, and lasso selection. Zooming and panning uses the defaults set by GtkUtilities. The left mouse button allows you to rubberband-select a zoom region. Use your mouse wheel or arrow-keys to pan or change the zoom level. Double-click, or press the 1:1 button, to restore the full view.
    Downloads: 0 This Week
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  • 18
    AutoAni

    AutoAni

    Compilation-free adaptive swf visualization template

    ...It focuses on ease of use for beginners by removing the need to install Flash or compile code—users simply prepare their data and images, place them in the same directory, and open the provided SWF file with any compatible player. The template comes with built-in Source Han Sans fonts, ensuring consistent text rendering without requiring users to install additional fonts. It supports smooth and adaptive animation with variable and uniform speed algorithms, making transitions between data states visually clear and accurate. Configuration is handled through simple CSV files, allowing users to adjust layout, speed, positioning, and formatting without editing the source code directly. ...
    Downloads: 0 This Week
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  • 19
    JuliaFEM.jl

    JuliaFEM.jl

    The JuliaFEM software library is a framework

    The JuliaFEM software library is a framework that allows for the distributed processing of large Finite Element Models across clusters of computers using simple programming models. It is designed to scale up from single servers to thousands of machines, each offering local computation and storage. The JuliaFEM software library is a framework that allows for the distributed processing of large Finite Element Models across clusters of computers using simple programming models. It is designed...
    Downloads: 0 This Week
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  • 20
    NCVTK: A VTK-based tool to visualize data stored in the NetCDF file format.
    Downloads: 0 This Week
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  • 21
    just-dashboard

    just-dashboard

    Dashboards using YAML or JSON files

    Dashboards using YAML or JSON files. Create a public GitHub gist with a file named dashboard.yml or dashboard.json (depending on your preferred format) As your dashboard is just data, you can generate it instead of repeating yourself. You can do that by generating the YAML or JSON file yourself, or you can use jq queries in your YAML file. And one with a dashboard that contains a component that can fetch the data from other other gist and turn it into 3 different charts. ...
    Downloads: 3 This Week
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  • 22

    TreeForm Syntax Tree Drawing Software

    Syntax Tree Drawing Software (Linguistics)

    ...Mac users can install the software through the new package, but must give authority through "System Preferences" > "Security & Privacy". Windows and Linux users can run the software through the JAR file directly. All users must have Java 8 or higher installed. https://java.com/en/download/
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    Downloads: 98 This Week
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  • 23
    tota11y

    tota11y

    An accessibility (a11y) visualization toolkit

    ...Instead, tota11y aims to reduce this barrier of entry by helping visualize accessibility violations (and successes), while educating on best practices. tota11y is a single JavaScript file that inserts a small button in the bottom corner of your document. The toolbar consists of several plugins that each provide their own functionality. Many of these plugins "annotate" elements on the page. Sometimes to show their existence, other times to point out when something's wrong. tota11y makes it easy to spot some of the most common accessibility violations made by page authors today.
    Downloads: 0 This Week
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  • 24
    md2googleslides

    md2googleslides

    Generate Google Slides from markdown

    ...While it does not yet produce stunningly beautiful decks, you are encouraged to use this tool for quickly prototyping presentations. The first time the command is run you will be prompted for authorization. OAuth token credentials are stored locally in a file named ~/.md2googleslides/credentials.json. Each time you will run the above comment, new slide deck will be generated. In order to work on exactly the same deck, just get the ID of the already generated slides. md2googleslides does not edit or control any theme-related options. Just set a base theme you want on Google Slides directly. ...
    Downloads: 0 This Week
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  • 25
    UndoTree

    UndoTree

    The undo history visualizer for VIM

    ...Unlike other editors, where undoing and then accidentally typing something can cause you to lose your edits, Vim allows you to revert to previous states without losing any data, as long as you keep the Vim session alive. If you want to keep your undo history permanently, Vim offers a persistent undo feature. This feature saves your undo history to a file on disk, allowing you to preserve your undo history across editing sessions. To enable persistent undo, refer to the instructions below. This can be a useful option for those who want to maintain a long-term undo history for a file or project.
    Downloads: 0 This Week
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