Tao3D is a programming language for real-time interactive 3D
Geostatistics and geosciences modeling software
A declarative 3D globe data visualization library built with Three.js
PyMOL is an OpenGL based molecular visualization system
Highly accurate ray-tracing software system for UNIX computers
A tool for 3D genome structure visualization
A WebGL-based 3D engine for technical visualization
STM data analysis
3D Charts - Templates for PovRay(TM)
Program for drawing 3D surfaces from parametric equations
Particle Image Velocimetry
GUI for building, simulating and optimizing kinetic models.
Short C++/Java/C#/Python benchmark
Educational open source tool for the design of geocentric orbits
Functy is a 3D graph drawing package that generates immediate results.
Extendible 2D color plotting tool.