Showing 2490 open source projects for "open-shell"

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  • 1
    ADOMA
    ADOMA stands for: Alternative Display Of Multiple Alignment. ADOMA can create four different displays of a multiple sequence alignment: a ClustalW alignment in HTML format, a simplified ClustalW alignment in HTML and/or txt format and a colored ClustalW alignment in HTML format. For examples of these outputfiles check the screenshots. ADOMA uses ClustalW to create the multiple alignment from DNA or protein sequences and displays them slightly different than the normal output of ClustalW....
    Downloads: 1 This Week
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  • 2
    scipion-xmipp

    scipion-xmipp

    Image processing framework to integrate EM software packages.

    Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated...
    Downloads: 0 This Week
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  • 3

    GraspIt

    A simulator for robotic hands.

    A simulator for robotic hands. This repository still contains the (somewhat outdated) releases and user manual. For the latest source code (recommended) please go to https://github.com/graspit-simulator
    Downloads: 0 This Week
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  • 4
    Qi - Quantitative Imaging (PIV and more)

    Qi - Quantitative Imaging (PIV and more)

    A collection of MATLAB tools for PIV, PTV, particle sizing, and more.

    Qi is a collection of MATLAB tools for the quantitative analysis of flow field images. Our Particle Image Velocimetry (PIV) tool, prana, implements a Robust Phase Correlation kernel for PIV analysis, and now includes Particle Tracking Velocimetry and sizing tools. Tools for pressure calculation, proper orthogonal decomposition (POD), and 3d imaging are under development.
    Downloads: 0 This Week
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  • 5
    RPy (R from Python)
    RPy is a very simple, yet robust, Python interface to the R Programming Language. It can manage all kinds of R objects and can execute arbitrary R functions (including the graphic functions).
    Downloads: 19 This Week
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  • 6
    CPS Wildfire Management Tool

    CPS Wildfire Management Tool

    A wildfire decision support system and visualization tool from Emxsys.

    The Wildfire Management Tool (WMT) predicts the potential fire behavior of a wildland fire. WMT incorporates a 3D terrain viewer, the tenets of the Campbell Prediction System (CPS) and the Rothermel fire spread equations to depict fire behavior. WMT is used to adjust tactics & strategies to ensure the safety of firefighters and the effective use of firefighting resources. Requires Java 8 (included) - http://www.java.com/download
    Downloads: 2 This Week
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  • 7
    MicrobeGPS

    MicrobeGPS

    The Explorative Taxonomic Profiling Tool for Metagenomic Data

    MicrobeGPS is a bioinformatics tool for the analysis of metagenomic sequencing data. The goal is to profile the composition of metagenomic communities as accurately as possible and present the results to the user in a convenient manner. One main focus is reliability: the tool calculates quality metrics for the estimated candidates and allows the user to identify false candidates easily.
    Downloads: 0 This Week
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  • 8

    ProBez

    Projections of Bezier curves

    Interface to manipulate with 3d gragic,s reading initial data fron an XML file, created by user which represents 3d model and saves data in vectorized format.
    Downloads: 0 This Week
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  • 9
    Interactive SBML Simulation Tool
    This project hosts the 'Simulation Tool', an extensible, interactive environment for carrying out simulation experiments of SBML models. This project can use RoadRunner or SBW enabled simulators to carry out simulations.
    Downloads: 0 This Week
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  • 10
    QMapControl is a Qt widget which enables your applications to use map data from different sources on desktop or mobiles. Maps can be enriched by custom objects which will be drawn into the map.
    Downloads: 2 This Week
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  • 11
    OpenGL Samples Pack
    A collection of OpenGL samples: It doesn't contain a lot of comments, nor does it use the features for complex effects, but they still show how to set up all the different new features.
    Downloads: 36 This Week
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  • 12
    New CTruck3D Rally

    New CTruck3D Rally

    Free-roaming 3D racing game featuring advanced terrain rendering

    It's a free-roaming 3D racing game featuring advanced terrain rendering. For small file-size, a 4k x 4k terrain is available, sampled meter-by-meter so it's very smooth. Lightweight program. This is the form in which I wished to do the first release of the terrain rendering Algorithm I have developed throughout almost 2 years. Written in C++, featuring multithreading (2 threads): a total remake of the first 3D game I did years ago, CTruck3D_Simplex and sequels. This works better,...
    Downloads: 1 This Week
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  • 13
    VERDI is a flexible, efficient, and modular Java-based visualization software tool that is used to visualize multivariate four dimensional gridded environmental datasets such as those output by air quality models.
    Downloads: 0 This Week
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  • 14
    gMol

    gMol

    gMol molecular graphics

    We've moved to https://github.com/tjod/gMol/wiki gMol is an interactive visualization system used to display and manipulate 3-dimensional models of scientific data, such as molecular structures and surfaces. It contains both OpenGL and web browser widgets that enable flexible user interfaces.
    Downloads: 0 This Week
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  • 15
    PIHMgis is a “tightly-coupled” GIS interface to Penn State Integrated Hydrologic Model (PIHM). It is open source, platform independent and extensible. The “tightly-coupled” integrated GIS interface to PIHM has been created in the Open Source QGIS
    Downloads: 0 This Week
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  • 16
    ILNumerics.Net
    math lib for .NET. n-dim arrays, complex numbers, linear algebra, FFT, sorting, cells- and logical arrays as well as 3D plotting classes help developing algorithms on every platform supporting .NET. Sources from SVN, binaries: http://ilnumerics.net
    Downloads: 0 This Week
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  • 17
    OpenGL Mathematics (GLM)
    OpenGL Mathematics (GLM) is a C++ mathematics library for 3D software based on the OpenGL Shading Language (GLSL) specification.
    Downloads: 44 This Week
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  • 18
    Biological Network Analyzer
    Workbench for visualizing biological networks (regulatory, interaction, and metabolic). Can be used as a front-end for BNDB datawarehouses, but also as stand-alone tool.
    Downloads: 0 This Week
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  • 19
    SignalDiagrams

    SignalDiagrams

    Digital/Analog signals visualization tool

    A JavaFx 8 educational application that will let you visualize digital and analog signals from a binary input and let you export the chart in SVG (Everything is in progress). Digital: Bipolar, CMI, NRZ-L, NRZ-M, NRZ-S, Manchester, Manchester differential, Miller, MLT-3, pseudoternary, RZ, Unipolar. Analog: Phase, Frequency, Amplitude.
    Downloads: 0 This Week
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  • 20
    MAtrix Sparse not much Computational Toolkit
    Downloads: 0 This Week
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  • 21
    A Perl object-oriented library for plotting graphs with Gnuplot.
    Downloads: 0 This Week
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  • 22
    Pure Java programming interface library for GNUPlot
    Downloads: 0 This Week
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  • 23

    flow visualization toolbox

    matlab 2D image processing GUI toolbox for flow visualization

    A general flow visualization Matlab toolbox for image processing of some common planar/surface visualization techniques from PLIF (Planar laser induce fluorescence) for tracer distribution, BOS (background oriented Schlieren) for density, TSLC (Temperature sensitive liquid crystal) for thermal and PSP (Pressure sensitive paint) pressure distribution measurement. This work is part of author's PhD study, under Dr S. Zhong @ the University of Manchester's supervision, guidance and...
    Downloads: 0 This Week
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  • 24
    Cybervision - 3D reconstruction software

    Cybervision - 3D reconstruction software

    Cybervision is a 3D reconstruction software for SEM images

    Project has moved Github at https://github.com/zlogic/cybervision Cybervision is a 3D reconstruction software for SEM images. It's an abandoned project, but can be useful as a working example for many, many technologies, such as: * Qt (including threads, vectors, graphics and OpenGL) * Eigen library (http://eigen.tuxfamily.org/) * libsift library (https://sourceforge.net/projects/libsift/) * OpenCL and of course, 3D reconstruction in general.
    Downloads: 0 This Week
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  • 25
    Kity Minder

    Kity Minder

    Baidu brain map

    KityMinder is another masterpiece of the f-cube group (formerly the UEditor group) of the Baidu FEX team. As an online brain map editing tool, it has an interactive experience no less than the native brain map tool. At the same time, it gives full play to the advantages of web cloud storage, and can directly synchronize the edited brain map to the cloud. In addition, with the original "cloud disk sharing" function, users can directly generate an online link from the currently edited brain...
    Downloads: 3 This Week
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