Open Source Linux Data Visualization Software - Page 24
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Data Visualization Software for Linux
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K3DSurf (now MathMod) is a program to visualize and manipulate Mathematical models in three, four, five and six dimensions. K3DSurf supports Parametric equations and Isosurfaces. ****** Welcome to the realm of complex numbers! Change-log for MathMod-11.1 (16/06/2021) 1) Support of graphing functions with complex numbers Z=u+iv in 3D and 4D spaces (demo scripts: "Complex3D_xx" and "Complex4D_Saddle") 2) Added support for HSV (hue, saturation, brightness) coloring model (script: "Complex_Domain_Coloring") 3) Texture definitions (RGB and HSV) for parametric surfaces can now be expressed as functions of complex numbers 4) Added a software implementation for the OpenGL variable gl_FrontFacing (fixed an issue with GPU drivers on MacOSX Catalina). The activation of this patch is available from mathmodconfig.js ("OpenGlConfig"-->"GL_FrontFacingSupport"=false) or the GUI("Appearance"-->"OpenGL Front Surface Support") 5) Bug-fixes, code optimization and documentation update.
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XCSoar
... the open-source glide computer
XCSoar is a tactical glide computer for Android, Linux, macOS, and Windows. -
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High Dynamic Range Visual Difference Predictor (HDR VDP) is a perceptual metric that can predict whether differences between two images are visible to the human observer or not.
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Analyze and visualize tours in many variations, which are recorded with a GPS device, bike-, exercise- or ergometer-computer. Some highlights: Tools are available to adjust recorded data, GPS tours can be visualized in customizable maps, ...
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FractalNow
Fast, advanced, multi-platform fractal generator
FractalNow provides users with tools to generate pictures of various types of fractals quickly and easily. It is made of both a command line tool, FractalNow, and a graphical tool, QFractalNow. The graphical tool, based on Qt library, allows users to explore fractals intuitively and generate pictures. Both tools are entirely multi-threaded and implement advanced algorithms and heuristics that make computation very fast compared to most existing free fractal generators. -
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GXSM
Scanning Probe Microscopy Controller and Data Visualization Software
GXSM -- Gnome X Scanning Microscopy: A multi-channel image and vector-probe data acquisition and visualization system designed for SPM techniques (STM,AFM..), but also SPA-LEED/LEED/LEEM data analysis. A plug-in interface allows any user add-on data-processing and special hardware and instrument support. Latest: NC-AFM and related explorative methods as SQDM can be configured. High-Speed external PAC-PLL hardware option with digital DSP link. Based on several hardware options it supports a commercially available DSP hardware and provided also Open Source Code for all the low level signal processing tasks and instrument controls in a most flexible and adaptable manner. All latest software is available via github.com/pyzahl/Gxsm4 (source code) or as binary for Ubuntu on https://launchpad.net/~totto/+archive/ubuntu/gxsm -
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linSmith
Smith chart intended for educational use
A Smith charting program. You can enter either discrete components or transmission lines, see the results on screen and/or generate Postscript output. Component values can be changed numerically or using scrollbars. -
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Cewolf
JSP tag library for displaying charts in web pages
Cewolf is a tag library for charts of all kinds. It enables every JSP to easily embed chart images. It can be used by any web applications running in a servlet container. No Java scriplet code is needed to define charts. -
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fsv, the 3D File System Visualizer, allows you to view a collection of directories and files as three-dimensional geometry. It represents all or part of a filesystem as a collection of blocks of varying sizes, each labeled with a filename, and arranged in
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SaVi satellite constellation visualizer
Earth orbits and satellite coverage display in 3D on your laptop.
SaVi - simulate Starlink, Iridium, Globalstar, O3b, GPS, Galileo and other satellite constellations, modify them, or design your own. Requires Tcl/Tk and Unix libraries; 3D viewing option requires Geomview running on X Window. -
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ApplicationBuilder.jl
Compile, bundle, and release julia software
Turn your Julia program into a standalone, distributable, statically-compiled "App". ApplicationBuilder compiles a Julia program and bundles it up into a distributable application, on macOS, Windows and Linux! After building, your users can download your application and run it without having Julia installed. -
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CNN Explainer
Learning Convolutional Neural Networks with Interactive Visualization
In machine learning, a classifier assigns a class label to a data point. For example, an image classifier produces a class label (e.g, bird, plane) for what objects exist within an image. A convolutional neural network, or CNN for short, is a type of classifier, which excels at solving this problem! A CNN is a neural network: an algorithm used to recognize patterns in data. Neural Networks in general are composed of a collection of neurons that are organized in layers, each with their own learnable weights and biases. Let’s break down a CNN into its basic building blocks. A tensor can be thought of as an n-dimensional matrix. In the CNN above, tensors will be 3-dimensional with the exception of the output layer. A neuron can be thought of as a function that takes in multiple inputs and yields a single output. The outputs of neurons are represented above as the red → blue activation maps. -
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Chromatone
Chromatone is a digital garden of visual music theory
Cards and short overviews on the physics and physiology of vision and hearing and their intersection at visual music research, exploration, practice, and self-expression. Useful tools to have in the pocket like a pack of interactive cards to learn and use in everyday music practice. These are open source web experiments with different aspects of sound and color. Chromatone is an open source research and design project to explore, develop and implement the scientific way of visual music education, communication and performance. We've discovered complete and coherent Visual Music Language there. It's evolving through further merging colors with notes, rhythms with shapes, intervals with gradients, chords and scales with palettes. And we pave the way for new generations of visual music explorers. -
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Cleaver
30-second slideshows for hackers
Cleaver is a one-stop-shop for generating HTML presentations in record time. Using some spiced up markdown, you can produce good-looking, interactive presentations with a just a few lines of text. Cleaver supports several basic options that allow you to further customize the look and feel of your presentation, including author info, stylesheets, and custom templates. Cleaver has substantial theme support to give you more fine-grained control over your presentation, similar to options. Instead of manually specifying a stylesheet, template, layout, and others, you can specify a single theme containing each of these assets. Cleaver comes with a stylesheet that looks good by default, but you can extend it at your heart's desire. Themes are prepackaged options you can invoke from a directory, URL, or even a GitHub repository. -
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ComplexHeatmap
Make Complex Heatmaps
ComplexHeatmap is an R/Bioconductor package by Zuguang Gu et al. designed to create highly flexible, complex, richly annotated heatmaps and related visualizations. It allows arranging multiple heatmaps, adding annotations, combining heatmaps, customizing colors, layouts, and integrating other plots. Often used in genomics/bioinformatics to show expression, methylation, etc., with sidebars, annotations, clustering, etc. Highly customizable layout: combining different heatmaps, arranging and splitting, dealing with multiple heatmap merges, combining with other plots etc. Integration with Shiny / interactive heatmaps via companion packages (InteractiveComplexHeatmap) to allow interactivity, etc. -
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ImplicitGlobalGrid.jl
Distributed parallelization of stencil-based GPU and CPU applications
ImplicitGlobalGrid is an outcome of a collaboration of the Swiss National Supercomputing Centre, ETH Zurich (Dr. Samuel Omlin) with Stanford University (Dr. Ludovic Räss) and the Swiss Geocomputing Centre (Prof. Yuri Podladchikov). It renders the distributed parallelization of stencil-based GPU and CPU applications on a regular staggered grid almost trivial and enables close to ideal weak scaling of real-world applications on thousands of GPUs [1, 2, 3]. ImplicitGlobalGrid relies on the Julia MPI wrapper (MPI.jl) to perform halo updates close to hardware limit and leverages CUDA-aware or ROCm-aware MPI for GPU-applications. The communication can straightforwardly be hidden behind computation [1, 3] (how this can be done automatically when using ParallelStencil.jl is shown in; a general approach particularly suited for CUDA C applications is explained in. -
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Jupyter Dock
Perform molecular docking protocols interactively
Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results. These notebooks are Python 3 compatible. Each protocol and Jupyter notebook has its own test folder for testing and reproducibility evaluation. For all notebooks, the demonstration includes the use of AutoDock Vina and Ledock. When available, some alternatives are mentioned in the protocol. Jupyter Dock's initial goal was to provide a set of pythonic protocols for molecular docking. Nonetheless, there is a dearth of docking tools in Python for all of the steps and protocols (i.e. pocket search for blind docking). Furthermore, the majority of well-known and widely used molecular docking software have been developed as stand-alone executables or as components of software suites. -
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MonteCarlo.jl
Classical and quantum Monte Carlo simulations in Julia
MonteCarlo.jl is a package implementing classical and quantum Monte Carlo simulations primarily for solid state physics. Currently the focus is on finding a overall design for the package and verifying that determinant Quantum Monte Carlo (DQMC) is working correctly. As such the package may still go through significant changes and the documentation may be outdated and incomplete. Note that classical Monte Carlo is also not a focus at this point. It is probably usable, but a lot of the adjustments made to DQMC have not been added to classical Monte Carlo, or have been added without thorough testing. -
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VisPy
Main repository for Vispy
Vispy is an open-source, high-performance interactive visualization library in Python, designed for creating scientific visualizations and interactive plots. It leverages the power of modern Graphics Processing Units (GPUs) through OpenGL to render large datasets efficiently. Vispy supports a wide range of visualization types, including 2D plots, 3D visualizations, volume rendering, and more, making it suitable for scientific research, data analysis, and educational purposes. -
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flot
Attractive JavaScript charts for jQuery
Flot is a pure JavaScript plotting library for jQuery, with a focus on simple usage, attractive looks and interactive features. Works with Internet Explorer 6+, Chrome, Firefox 2+, Safari 3+ and Opera 9.5+. Additional examples are bundled with Flot. Also take a look at the Flot Usage Wiki for screenshots and stories from people and companies using Flot. Take a look at the the examples in examples/index.html; they should give a good impression of what flot can do, and the source code of the examples is probably the fastest way to learn how to use flot. Just include the JavaScript file after you've included jQuery. You need at least jQuery 1.2.6, but try at least 1.3.2 for interactive charts because of performance improvements in event handling. The plot function immediately draws the chart and then returns a plot object with a couple of methods. The placeholder is a jQuery object or DOM element or jQuery expression that the plot will be put into. -
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ggpubr
'ggplot2' Based Publication Ready Plots
ggpubr is an R package that provides easy-to-use wrapper functions around ggplot2 to create publication-ready visualizations with minimal code. It streamlines plot creation for researchers and analysts, allowing features such as statistical annotation, theme customization, and plot arrangement with fewer lines of code. -
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ngx-datatable
A feature-rich yet lightweight data-table crafted for Angular
ngx-datatable is an Angular component for presenting large and complex data. It has all the features you would expect from any other table but in a light package with no external dependencies. The table was designed to be extremely flexible and light; it doesn't make any assumptions about your data or how you: filter, sort or page it. It was built for modern browsers using TypeScript, CSS3 and HTML5 and Angular 8.0.0. This is the sister project of the angular-data-table that is designed for Angular 1.x. Intelligent Column Width Algorithms (Force-fill & Flex-grow). Fixed AND Fluid height. Left and Right Column Pinning. Row Detail View. Decoupled theme'ing with included Google Material theme. Light codebase / No external dependencies. AoT Compilation Support. Universal Support. Cell & Row Selection. -
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Java 2D & 3D visual entity relationship design & modeling (ERD,SQL) for Oracle,MSSQL,Postgres,MySQL,...,Database change&dictionary management, Swing Data Binding, Apache FOP Renderer for dot matrix printers,Sparx Enterprise Architect Reports + more
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The PDL module gives standard perl the ability to COMPACTLY store and SPEEDILY manipulate the large N-dimensional data sets that are the bread and butter of scientific computing.