Search Results for "program files"

...Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other quantum chemistry programs. Files can be transferred directly from several databases, including RCSB, EDS, NCI, PubChem, and MaterialsProject. ...

NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/

...Recently, the advent of next generation sequencing enables the concurrent identification of homozygous regions and the detection of mutations relevant for diagnosis, using data from a single sequencing experiment. In this respect, we have developed a novel tool that identifies homozygous regions using deep sequence data. Using *.vcf files as an input file, our program identifies the majo

...To use graphICs you need to download the JAR-file containing the program (no installation needed) and the MAP-file containing the color-information for the design (you can modify it or you create your own). To create graphic or PDF-files you need to download Asymptote from asymptote.sourceforge.net. Look at http://sourceforge.net/p/graphicsic/wiki/Usage/ for the Usage. You can download the actual version of graphICs, an example MAP-file and the Bachelor-Thesis about graphICs on the download page.

Wow Log Parser is a combat log parser for the game World of Warcraft. The purpose of the program is to parse the files generated with the /combatlog command. The source code can be found on: http://www.gurre.eu/wowlogparser/forum

A library written in Java to manipulate GPX files. Also contained is a GUI program to visualize GPX files and the effects of manipulating them.

This program reads a sample file and draws the a chart. To draw chart, JFreeChart library is being used. Sample files are .run, .rav, and .rtr files.

GUI for creating Virtual networks with use of VMware Workstation and technology VMware Teams.This program lets you to create and save *.vmtm files which are used for storing information about VMware Virtual Team.

This program is for generating 3-D regular grid files from scattered data. It is GUI based, reads scattered data, gets options about how to make the 3-D interpolation.