Showing 34 open source projects for "computer science"

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  • 1
    Jmol

    Jmol

    An interactive viewer for three-dimensional chemical structures.

    Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other...
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    Downloads: 518 This Week
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  • 2
    MyTourbook
    Analyze and visualize tours in many variations, which are recorded with a GPS device, bike-, exercise- or ergometer-computer. Some highlights: Tools are available to adjust recorded data, GPS tours can be visualized in customizable maps, ...
    Downloads: 13 This Week
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  • 3

    TreeForm Syntax Tree Drawing Software

    Syntax Tree Drawing Software (Linguistics)

    TreeForm Syntax tree drawing software is a Linguistic Syntax/Semantics tree drawing editor. Designed for graphical n-ary tree drawing. Mac users can install the software through the new package, but must give authority through "System Preferences" > "Security & Privacy". Windows and Linux users can run the software through the JAR file directly. All users must have Java 8 or higher installed. https://java.com/en/download/
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    Downloads: 62 This Week
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  • 4
    GMOL

    GMOL

    A tool for 3D genome structure visualization

    ...This software was built upon the pre-existing Jmol package by Prof. Cheng's group. The software is developed in Prof. Jianlin Cheng's Bioinformatics, Data Mining and Machine Learning Laboratory in the Computer Science Department at the University of Missouri - Columbia, USA. The project is supported by the National Science Foundation (grant no. DBI1149224). If you use GMOL in your research, please cite: Nowotny, Jackson, Avery Wells, Oluwatosin Oluwadare, Lingfei Xu, Renzhi Cao, Tuan Trieu, Chenfeng He, and Jianlin Cheng. "GMOL: an interactive tool for 3D genome structure visualization." ...
    Downloads: 3 This Week
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  • 5
    Visualization of Protein-Ligand Graphs

    Visualization of Protein-Ligand Graphs

    Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools

    NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/
    Downloads: 0 This Week
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  • 6
    Argunet

    Argunet

    argument map editor for analyzing and visualizing complex debates

    Argunet is a client-server software for computer-supported argument visualization (CSAV). Reconstructed debates are visualized as argument maps and can be shared through the Argunet Server.
    Downloads: 4 This Week
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  • 7
    Impact Finite Element Program
    Impact is an explicit Finite Element Program Suite which simulates dynamic impact events. It has a range of elements, contact handling and different material laws. Models can be created, solved and analyzed with the included pre- and postprocessor. Impact is based on an Explicit Time stepping algorithm. These kind of codes are used to simulate dynamic phenomena such as car crashes and similar, usually involving large deformations.
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    Downloads: 1 This Week
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  • 8
    A 3D engine written in Java aimed at students of computer science. This engine makes it very easy to visualize objects and create 3D applications.
    Downloads: 0 This Week
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  • 9
    Archimedes: An architecture open CAD
    Archimedes will be a Computer Aided Design (CAD) program developed side by side with architecture offices in order to fulfill all their needs. This way, we hope to develop software better suited for architects than the currently widely used AutoCAD.
    Downloads: 10 This Week
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  • 10
    jSET - Java Software Evolution Tracker is a software visualization tool that allows practitioners to assess the magnitude of changes across the versions of a software system.
    Downloads: 0 This Week
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  • 11
    j-Algo is an algorithm visualization tool, especially useful for students and lecturers of computer science. It is written in Java and platform independent. j-Algo is developed at Dresden University of Technology.
    Downloads: 0 This Week
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  • 12
    This project provides a java implementation of the Captcha project ( see http://www.captcha.net ). A CAPTCHA is a program that can generate and grade tests that: -Most humans can pass. -Current computer programs can't pass.
    Downloads: 1 This Week
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  • 13
    jQuantum
    jQuantum is a Java program to simulate a quantum computer, to design quantum circuits, and to visualize the execution of quantum algorithms. Another main purpose, however, is to create images in your head, and thereby - understanding.
    Downloads: 2 This Week
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  • 14
    Desview
    Desview Project. Science Computer Final Course Project, 2010/1 in PUCRS.
    Downloads: 0 This Week
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  • 15
    Avenzoar Digital Pathology Tool
    Avenzoar is a one-year exploration of renal cell carcinoma morphology and its related single nucleotide polymorphisms (SNPa) as a method of automating diagnosis of cancer by using a computer-aided decision tree controlled by analytical statistics.
    Downloads: 0 This Week
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  • 16
    Geoplan-Geospace is a 2D and 3D interactive geometry software to create and manipulate interactive figures for eLearning. It features euclidean geometry objects (lines, circles), numerical functions, numerical sequences, geometrical transformations.
    Downloads: 0 This Week
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  • 17
    The Java parallel to the popular Intel computer vision library, OpenCV. OpenJCV = Open Java Computer Vision
    Downloads: 0 This Week
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  • 18
    Clothes - sewing CAD for creation of models of clothes. Based on the new concept of the automated designing of clothes with use of parametrical model. Creates a base design of model of clothes and allows to change it depending on necessity of updating.
    Downloads: 0 This Week
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  • 19
    The Optics Project on the Web (WebTOP) is a 3D, interactive computer graphics system that visualizes optical phenomena. Its purpose is to help instructors teach and students learn about optics. It is a platform independent Java application that uses X3D.
    Downloads: 5 This Week
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  • 20
    ProteinShader is a molecular visualization tool that can produce illustrative renderings of proteins that approximate what an artist might create using pen and ink. This free platform-independent program is written in Java and OpenGL Shading Language.
    Downloads: 0 This Week
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  • 21
    It provides a graphical animated representation of a network simulation run (e.g. for ns-2). Further, common metrics are calculated and displayed. The tool is written in Java and supplies 2 frontends (applet and stand-alone application).
    Downloads: 0 This Week
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  • 22
    FrAid(FRactal AID) is an interface to Java, allowing it to proc. math. data(functions/equations). A compl. standalone system utilizing the FrAid prog. lang. is available(no need to be Java programmer to use it!). Use instead of Matlab. High res. graphics
    Downloads: 0 This Week
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  • 23
    A Java program to enable users to comprehend the "Contraction and Convergence" model for reduction in carbon emissions as proposed by the Global Commons Institute. Intended primarily as a demo for government delegates at UN conferences
    Downloads: 0 This Week
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  • 24
    The virtual lab is a NASA-funded project to provide simulated instrumentation. ITG has developed a Virtual Microscope (Virtual SEM and LM) for viewing high-resolution, multi-dimensional image datasets. More info and data: http://virtual.itg.uiuc.edu
    Downloads: 0 This Week
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  • 25
    This software system serves as both a DICOM image viewer as well as a diagramming tool for collaborating notes on the given image sets. This my Computer Science graduate thesis project at Loyola Marymount University.
    Downloads: 0 This Week
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