4-Dimensional Cell Simulator (4DiCeS) is a framework on hybrid (stochastic and deterministic) modeling and simulation of (whole) cell environments in 4D. The framework may incorporate any reaction and diffusion algorithms applicable in a 4D grid layout.
The SESAME (Simulation of Embedded System Architectures for Multilevel Exploration) software system is an embedded system co-simulation environment and research tool which implements the ideas of the SESAME project at the University of Amsterdam.
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GrALoG is a tool for editing and visualising graph-like-structures and the results of algorithms running on them. Through it's plugins GrALoG is hugely extendable, i.e. plugin-developers can define their own graph-like structures and algorithms.
SONIVIS:Tool aims at analysing social (virtual) information spaces like Wikis. These spaces are investigated by using different network definitions (collaboration/information networks). Clustering algorithms and statistiscal analyses are provided.
MZ-Analyzer is a tool for visualization and analysing of multiple mass spectrometry data in 2D and 3D mode, including the function of quantitating the LC-peak of the specified identified peptides.
The OdfChartBuilder Java™ API can be used to read and render charts specified in Open Document Format XML. Charts are rendered using the JFreeChart open source API. The project includes a Java™ Swing application (OdfChartViewer) for chart viewing.
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An extended version of RoboCup Rescue Simulation official viewer intended to make it more informative. It utilizes charts, statistics and some missing little useful features.
This Java native library wraps OpenCV (Computer Vision Lib.) function cvMatchTemplate and implements methods for utilities result visualization. It allows efficient images template matching using Normalized Cross-Correlation (NCC) and others algorithms.
It provides a graphical animated representation of a network simulation run (e.g. for ns-2). Further, common metrics are calculated and displayed. The tool is written in Java and supplies 2 frontends (applet and stand-alone application).
Geneview is a visualisation tool to display genetic sequence data stored in nucleic sequence databases like <A HREF="http://www.ncbi.nlm.nih.gov/Genbank/">GenBank</A>.
The Databionics ESOM Tools offer many data mining tasks using Emergent Self-Organizing Maps. Visualization, clustering, and classification of high-dimensional data using databionics principles can be performed interactively or automatically.
JFunctionViewer is a simple and fast OpenSource function plotter. Since it is written in Java it is Platform independend and can even be run from inside a Browser.
A basic ray tracer written in the Scala language. Features includes photon mapping and a frontend written in Groovy. Planed features are volumetric lighting and shadow photons.
Automatic Conversion Tool for Accessible Web (ACTAW) is a project that tries to improve the Web Accessibility in an automatic way. ACTAW applies the WAI guidelines 1.0 defined by the World Wide Web Consortium (W3C). Developed in Java.
EZ-Access is an audit tool verifying website conformance to the WCAG 1.0 guidelines and acting as a visual deficiency simulator (color blindness, blurred vision,...), enabling web developers to find accessibility issues.
Free web3D interactive, extensible, full-scale earth map created and annotated by the public. Like a 3D google + world wiki. Includes integration with enterprise web services. OGC 3D services and 3D chat (vrspace) planned. X3D & VRML standards based.
A treemap visualization java library, to implement Shneiderman's treemap easily (http://www.cs.umd.edu/hcil/treemaps/). Shows efficiently tree data as a rectangle colored map. Usefull to monitor thousand of files in a little window.
Plantra-Trajectory Planning is a software to rebuild surfaces from cloud points, featuring shaded 3D visualization and path planning for robotics paths. It uses Voronoi diagram, Cyrus-Beck clipping, Delaunay triangulation and B-Splines.