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JOELib/JOELib2 is a cheminformatics library which supports SMARTS substructure search, descriptor calculation, processing/filtering pipes, conversion of file formats, 100% pure Java, and interfaces to external programs (e.g. Ghemical) are available.
Java package to study a clustering model described in the paper \"Novel Clustering Algorithm Based Upon Games on Evolving Network\" by Q. Li, Z. Chen, Y. He and J-P. Jiang (in arxiv: http://arxiv.org/pdf/0812.5064v1), generalizations and similar issues.
A real-time graph plotter. While your application is computing and logging results to a CSV file using the LiveGraph Writer API, the plotter lets you visualise and monitor the results live - by instantly plotting charts and graphs of the data.
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Visualization of finite state machines as a network graph. Accepted input files at the moment are: net files exported from xfst (Xerox Finite-State Tool) and lexc files (Finite-State Lexicon Compiler).
@rbre uses X3D to let people create, visualize, browse and share genealogical data, by using 2D individual icons assembled in 3D family trees. @rbre will include P2P functions for sharing.
Azureus Plug-In that allocates the ip adresses of the peers to the country and the city they belong to and visualize that data on a world map or in statistics. This product includes GeoLite data created by MaxMind, available from http://www.maxmind.com/.
Generic TV is a java visualization tool. It realises the visualization of time dependent data with many possibilities for the user Interactions (allow color changing, data filter etc). GenTV allows viusalization of many file format as data input.
OntoViz, an ontology browser is an extension of my undergraduate honors thesis. This helps a user browse ontologies using a variety of graph drawing algorithms. The ontology can be specified using a text file, a local/remote database or a web service.
Puck is a visual programming language for learning to program. The goal is to create an environment which is easy to handle and prevents students from making syntax-errors. Puck-programs use Bricks that are combined to a program via Drag & Drop.
Hyperview3d allows the visualization of hyperbolic geometry models. Specifically the Klein , Poincare , Weierstrass and Gans model. It allows switching between one model to the other and user defined texture mapping onto the 3D model.
This tool is for parse the complex delphi project and generate the graphics output of class inter-relationship layout. When you start maintain the delphi project use this tool to understand the system structure.
A utility for animating molecular vibrations. Normal modes are read from a file automatically determined to be from Aces2, Gamess, PC Gamess, Gaussian 90/92/95/94/98, ADF, Dalton, Jaguar, MOPAC, or Spartan.
XGL Viewer: A simple fast program to load the XGL standard file format and display it using JOGL (OpenGL) allowing the user to move the object around in space, rotate, zoom, spin, ect... This loader should be easily integrated into any program.
Java3D 3DS FileLoader for platforms supporting JDK1.4 and Java 3D
Highly functional, multiplatform 3DS File format loader
Supports:
Heirarchical animation
Cameras
Point Lights
Directional Lights
Textures
Smooth Groups
and other features
Object Relational Persistence and Object-Based SQL Query API. Similar to that of Hibernate or JDO but much better structured design. This API has several layers of abstraction to be useful for nearly any situation.
Java classes and jsp tag library that constructs tree controls for web pages. We have implemented an XML data source, file system data source, and a cross-browser DHTML tree view. Abstracted roles for data source, view, and renderer.
Flow4J is a java framework, that enables the user to model process flow with a gui interface. The flow may include tasks, decisions or calls to other process flows. The saved flow is in a jar file together with its bytecode.
FileConv is a set of utility classes that allow java programmers to load/write 3d files of various formats to/from 3d applications and convert between various file formats so that people using different 3d applications can collaborate on the same project
Pattern recognition software package. It includes several classification and clustering algorithms. It can read data from a
set of images, an ASCII file or a JDBC connection. A small TCP data server with its corresponding JDBC driver is included.
This project provides software resources for creating solid models of proteins that can be printed on color 3D printers. The main focus is a java program that reads in a PDB file and produces a PLY format stick representation of the protein.
NecJGui is an antennas design tool, interface for Numerical Electromagnetic Code. It allows easily making NEC input files, and viewing them in 3D. It also contains a version of the simulator, so it's complete IDE for full-wave EM simulation.