Showing 477 open source projects for "gnu linux"

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  • 1
    VANESA
    This project moved to GitHub in 2021 and is available at: https://cbrinkrolf.github.io/VANESA/ This tool is a platform-independent software to create individual pathways and to examine biological networks of distributed, heterogeneous data sources, e.g. KEGG, BRENDA. VANESA also offers Petri net modeling of extended hybrid Petri nets which can be also simulated using the OpenModelica framework.
    Downloads: 0 This Week
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  • 2
    Karto

    Karto

    Tool to work on map data, to check the data and generate your own maps

    Karto allows to calibrate a scanned map (or aerial photos) with some known geo-points (Lambert, UTM, ...). After that, you can add any points (GPS points) in the map to build your own map. You can also add a transparent GIF image in the map after calibration (cave, mines, roads, ...). You can realize your own cartes with the data you add inside adding/showing/hiding layers of data. You can import/export your data files (after checking and correcting them) in differents formats.
    Downloads: 1 This Week
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  • 3
    PAMGUARD

    PAMGUARD

    Detection Classification and Localisation of marine mammals

    The PAMGUARD project develops software to help detect, locate and classify marine mammals using Passive Acoustic Monitoring. This project is being migrated to github at https://github.com/PAMGuard. Please go there for the latest updates. thank you sourceforge for hosting us for all these years.
    Downloads: 1 This Week
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  • 4
    Scanmap3D

    Scanmap3D

    3D Network Traffic Visualisation

    A java-based 3D Visualisation tool for analysing network traffic. Written with jMonkeyEngine.
    Downloads: 2 This Week
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    DynaQ

    DynaQ

    Innovative text document search. http://dynaq.opendfki.de for details.

    The goal of DynaQ is to develop an inquiry system to explore the personal information space, supporting you with the searching paradigm 'orienteering'. DynaQ is a (desktop)search engine with enhanced functionality for file, email and blog search. Look at our GitLab homepage for sourcecode and documentation: http://dynaq.opendfki.de
    Downloads: 0 This Week
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  • 6
    VIKAMINE is a flexible environment for visual analytics, data mining and business intelligence - implemented in pure Java. It features several powerful visualization and mining methods, and can utilize background knowledge.
    Downloads: 0 This Week
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  • 7

    TreeForm Syntax Tree Drawing Software

    Syntax Tree Drawing Software (Linguistics)

    TreeForm Syntax tree drawing software is a Linguistic Syntax/Semantics tree drawing editor. Designed for graphical n-ary tree drawing. Mac users can install the software through the new package, but must give authority through "System Preferences" > "Security & Privacy". Windows and Linux users can run the software through the JAR file directly. All users must have Java 8 or higher installed. https://java.com/en/download/
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    Downloads: 97 This Week
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  • 8
    Dexter is a little java program to interactively or semi-automatically extract data from scanned graphs. In its applet incarnation it is used by the Astrophysics Data System. A rudimenary standalone version is provided as well.
    Downloads: 2 This Week
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  • 9
    JSpecView Project

    JSpecView Project

    Spectroscopy Viewer

    The JSpecView Project initially provided JAVA applets for the display of JCAMP-DX and AnIML/CML spectral files. The source and binary files are available via the Code (sourceforge SVN) and Files menu options. See the WIKI pages (Hosted Apps) for more detail. Beginning September 2018 all code changes are being handled via the Jmol Sourceforge page. The codes has been fully merged and JSmol the JavaScript/HTML5 version of Jmol now includes the non-Java version of JSpecView.
    Downloads: 7 This Week
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  • 10
    Alevin2

    Alevin2

    Tool for the evaluation of ALgorithms for Embedding VIrtual Networks

    ALgorithms for Embedding VIrtual Networks Software to evaluate Virtual Network Embedding Algorithms.
    Downloads: 2 This Week
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  • 11
    JHotDraw is a two-dimensional graphics framework for structured drawing editors that is written in Java. It is based on Erich Gamma's JHotDraw, which is copyright 1996, 1997 by IFA Informatik and Erich Gamma.
    Downloads: 2 This Week
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  • 12
    Kitchen garden aid
    An easy to use application to design your kitchen garden or your house farm. Helps you plan your plants ( vegetables, fruit trees, herbs, flowers ) so that it respects the rules of crop rotation and companion planting. Based on square foot gardening. Requires Java 8.
    Downloads: 6 This Week
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  • 13
    GMOL

    GMOL

    A tool for 3D genome structure visualization

    GMOL is an application designed to visualize genome structure in 3D. It allows users to view the genome structure at multiple scales, including: global, chromosome, loci, fiber, nucleosome, and nucleotide. This software was built upon the pre-existing Jmol package by Prof. Cheng's group. The software is developed in Prof. Jianlin Cheng's Bioinformatics, Data Mining and Machine Learning Laboratory in the Computer Science Department at the University of Missouri - Columbia, USA. The project...
    Downloads: 0 This Week
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  • 14
    Effectopedia
    Effectopedia is open knowledge aggregation and collaboration tool that provides a means of describing adverse outcome pathways in encyclopedic manner.
    Downloads: 1 This Week
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  • 15

    Fudaa

    https://gitlab.com/fudaa

    Official site: https://fudaa-project.atlassian.net/wiki/spaces/FUDAA/overview Sources moved to GitLab: https://gitlab.com/fudaa
    Downloads: 5 This Week
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  • 16
    Plots a parameterized family of curves
    Downloads: 0 This Week
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  • 17
    As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the...
    Downloads: 2 This Week
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  • 18
    Penthode

    Penthode

    Penthode simulates, draw and plot electrical power distributions

    Given a simple net-list describing the high level power architecture of your system Penthode: - simulates the voltage and current from device turn on to the steady state. - highlights components working out of specification - draws a nice power tree diagram showing the currents/powers balance - plots node transient voltage and gate current waveforms It is possible to change component parameters interactively to improve the design
    Downloads: 0 This Week
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  • 19
    JPIV

    JPIV

    Particle Image Velocimetry

    JPIV is a platform independent, graphical stand-alone application for Particle Image Velocimetry (PIV) written in Java. PIV is an optical technique for measuring fluid flow velocities. JPIV moved to GitHub. Please visit us at: https://eguvep.github.io/jpiv/
    Downloads: 0 This Week
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  • 20
    CamShaft
    Calculation of camshafts - allows to define a camshaft profile on the set trajectory which should provide the given mechanism. The trajectory can be set graphically, co-ordinates or function.
    Downloads: 3 This Week
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  • 21
    Ycad is a library of CAD functions in Java. Currently only DXF is supported for reading, viewing and writing. The DXF drawing may be rendered to a Graphics object for printing or imaging.
    Downloads: 1 This Week
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  • 22
    SBML2LaTeX

    SBML2LaTeX

    A documentation and report generator for systems biological models

    SBML2LATEX is a tool to convert files in the System Biology Markup Language SBML) format into LATEX files. A convenient online version is available, which allows the user to directly generate report from SBML in form of PDF or TeX, which can be further processed to various file types including DVI, PS, EPS, GIF, JPG, or PNG. SBML2LATEX can also be downloaded and used locally in batch mode or interactively with its Graphical User Interface or several command line options. The purpose of...
    Downloads: 3 This Week
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  • 23
    A spring-based 3D graph layout tool written in Java. Rendering is performed in OpenGL via the JOGL library.
    Downloads: 0 This Week
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  • 24
    Maui

    Maui

    Maui is the Maltcms User Interface

    Maui is the Maltcms User Interface, a rich client application for Chromatography-Mass Spectrometry and related research areas.
    Downloads: 0 This Week
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  • 25
    Egonet is a program for the collection and analysis of egocentric network data. It helps you create the questionnaire, collect data, and provide general global network measures and data matrixes that can be used for further analysis by other software. Source code is hosted at http://github.com/egonet/egonet.
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    Downloads: 5 This Week
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