Search Results for "computer-aided software engineering" - Page 2
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Showing 150 open source projects for "computer-aided software engineering"
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An open source workbench for chemo- and bioinformatics built on the Eclipse Rich Client Platform (RCP).
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Visualization of Protein-Ligand Graphs
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/ -
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Argunet
argument map editor for analyzing and visualizing complex debates
Argunet is a client-server software for computer-supported argument visualization (CSAV). Reconstructed debates are visualized as argument maps and can be shared through the Argunet Server. -
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Phanto_maJ
build three dimensional structure
PhantomaJ is a software which aims to help users designing complexe three dimensional structures and building phantom banks. This software, implemented as an ImageJ plug-in, has been designed to be intuitive. PhantomaJ is thus "ready to use" for most users, but advanced users can choose to modify specific parameters such as intersection mode, intensity decrease function or virtual real three dimension. In addition, adding a new "basic form" consiste for advanced users to write two short... -
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scipion-xmipp
Image processing framework to integrate EM software packages.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated... -
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SyntheticWSI
Tools to generate and visualize artificial whole slide images
Java 8+ required. Collection of tools to help generate artificial Whole Slide Images (WSIs). A WSI is stored as a ZIP archive of JPG tiles, and this software contains a tool to visualize this format. SVS files can be used directly for texture extraction (thanks to the included Bio-Formats library). Main source files in package fr.unistra.wsi.synthetic. -
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Impact is an explicit Finite Element Program Suite which simulates dynamic impact events. It has a range of elements, contact handling and different material laws. Models can be created, solved and analyzed with the included pre- and postprocessor. Impact is based on an Explicit Time stepping algorithm. These kind of codes are used to simulate dynamic phenomena such as car crashes and similar, usually involving large deformations.
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Virtual instrumentation software, currently designed for modifying automobile engines. Intended as a modular framework to communicate with devices on an IO port (serial, parallel etc.) and allow a visual representation of the instrument.
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AsphaltOpen is a project to visualize data collected during road asphalting operations. Asphalt contractors can use the software to visualize their operations, learn from the visualizations, and improve their processes continually.
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TronTool
Tuning of java neuroph.org neural nets.
By using a neural net from neuroph.org with the programmlanguage Java, you can change the net by this software. Easy watch it on the screen and move the values up or down. More or less value at the output neurons. Saving, Loading from different .nnet`s. Adding comments. Changing the visible output neuron Setting wished input neurons to get visible. A small fast and easy weight version and a continuing version, which should get involved in the neuroph project. -
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Conzilla is a concept browser. It browses and edits 'context-maps', a construct similar to conceptual models, UML diagrams or mind-maps. Conzilla uses RDF to describe and distribute such models.
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Compiere MFG+SCM Manufacturing Extended System (MES). Include Shop Floor Control, Supply chain management, Quality management, modbus interface, iReport barcode extension etc. Support batch and on demand manufacturing. Works alone or connected to ERP.
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Bayesian Network tools in Java (BNJ) is an open-source suite of software tools for research and development using graphical models of probability. It is published by the Kansas State University Laboratory for Knowledge Discovery in Databases (KDD).
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fem3d
Java software for building a 3D model for FEM Analysis.
Basics of a CAD System. Lets users build 3D model of different geometry. Select properties and Analyze using FEM to get stress and displacements under loading. -
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ScreeningAssistant 2 is a modular software dedicated to perform various simple and advanced chemoinformatics analysis around chemical libraries.
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jSET - Java Software Evolution Tracker is a software visualization tool that allows practitioners to assess the magnitude of changes across the versions of a software system.
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Archimedes will be a Computer Aided Design (CAD) program developed side by side with architecture offices in order to fulfill all their needs. This way, we hope to develop software better suited for architects than the currently widely used AutoCAD.
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Galois sub-hierarchy builder
Visualize Galois sub-hierarchy of 2d matrix
GSH builder is a free Galois Sub-Hierarchy visualization tool. The algorithm for calculating GSH is called Pluton and the present Java realization is based on two articles. "Efficiently computing a linear extension of the sub-hierarchy of a Concept Lattice" by Anne Berry, Marianne Huchard, Ross M. McConnell, Alain Sigayret and Jeremy P. Spinrad. "Performances of Galois Sub-hierarchy-building algorithms" by Gabriela Arevalo, Anne Berry, Marianne Huchard, Guillaume Perrot and... -
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Gavrog stands for "Generation, Analysis and Visualization of Reticular Ornaments using Gavrog". It is a Java library together with a suite of interactive applications for the study of periodic net-like structures in space and their applications.
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Semtinel is an application framework for the semi-automatic creation, maintenance and analysis of hierarchical concept schemes (thesaurus, classification or ontology). Semtinel supports the development of new analysis methods and visualization techniques
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OrthoInspector is a new software system for orthology/paralogy analysis. Its purpose is to facilitate the installation and the maintenance of a database describing orthology/inparalogy relations and to provide tools to exploit these data.
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JEuclid is a complete MathML rendering solution, consisting of: a MathViewer application, command line converters from MathML to other formats, an ant task for autmated conversion, display components for AWT and Swing and a component for Apache Cocoon
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Cca-forum unifies the Common Component Architecture tools and tutorial. It includes the CCA specifications, the Ccaffeine framework for HPC, and related tools. These support multilanguage scientific and parallel computing.
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The final build of this software now is distributed in R, embedded in "RedeR': an R/Bioconductor package for hierarchical and nested network analysis... more about RedeR: http://bioconductor.org/packages/2.9/bioc/html/RedeR.html
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