Search Results for "clustering"

Visit our new site: http://socnetv.org Social Network Visualizer (SocNetV) is a social network analysis and visualization application. You can draw a social network (graph/digraph) or load an existing one (GraphML, UCINET, Pajek, etc), compute cohesion, centrality, community and structural equivalence metrics and apply various layout algorithms based on actor centrality or prestige scores (i.e. Eigenvector, Betweenness) or on dynamic models (i.e. Kamada-Kawai spring-embedder)

Analyses and Interactive visualizations of the structures, functions and actions of biomolecules including molecular surface computation, and protein-ligand interface and protein-ligand docking where the ligand could a small compound, a nucleic acid, membrane and other proteins, written in C++/Qt/openGL/GLSL with more than 125,000 lines of codes. In addition to Qt, the only external library needed is GSL everything else is coded from the scratch.

Open source animation of kmeans clustering in X Window System using the C++ libplotter library. Supports Linux, Mac, and BSD. Includes common initialization methods such as Forgy, Macqueen, random, and angular. Sample videos are available through the Files Tab above. The SVN repo is accessible thorugh the Code Tab above. Requires a C++ compiler, libplot-dev, and libncurses5-dev Mac alternative to libplot-dev: macports plotutils +x11

...Within the waveform space, cursor-based controls let the user select subregions of the waveform space or individual waveforms to view. The user may cluster waveforms manually or via one of several popular clustering programs. The classification along with waveform properties (width, etc.) can be saved to disk in simple text files. WaveSorter is written in C++, utilizes the GNU Scientific Library for all computation, and is highly parallelized; on modern hardware it can handle files containing several 100,000s of waveforms per channel with almost no noticeable loss in GUI fluidity and <1sec lags for files with >1,000,000 waveforms per channel. ...

Flow Investigation using N-Dimensions (FIND) is a program designed for analysis and visualization of Flow Cytometry data. FIND focuses specifically on automated population discovery (clustering) methods. The project targets both users and developers.

Fish is a visual cluster monitoring program that uses Ganglia to portray each node in a cluster as a separate fish with characteristics that describe the state of the node.

The Parallel Compositing library enables developers to write scalable 3D graphics applications. The library does sort-last compositing, and works on both clusters and SMP machines. The API aims to be the MPI of parallel compositing.

This is an opensource project for the calculation of the mathematical constant Pi. If you are a mathematician or programer please contribute ideas or code for this project. Non professionals are also welcome to contribute.

growler is a C++-based distributed object and event architecture. Its primary application has been in support of interactive, distributed visualization, "concurrent visualization", and computational steering.

Nodemon is a visualization tool for monitoring system resource utilization. It was developed for monitoring the Columbia supercomputer, a 10,240-processor Linux system at NASA Ames Research Center. It can monitor resources on any Linux system or cluster

a 3d replacement for mosix's boring text based mon program. Interaces with gomd (www.nonngu.org/gomd) so you dont have to run this big openGL app on your cluster, just a handy server.

TM4 is a suite of applications for managing and analyzing microarray data. TM4 provides data storage and tracking, image analysis, normalization, data filtering, clustering and statistical analysis capabilities. Includes MADAM, Spotfinder, MIDAS, and MeV.