Search Results for "data visualization, research" - Page 45
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Showing 3229 open source projects for "data visualization, research"
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UV-CDAT
Ultrascale Visualization Climate Data Analysis Tools
Ultrascale Visualization Climate Data Analysis Tools (UV-CDAT), is a powerful and complete front-end to a rich set of visual-data exploration and analysis capabilities well suited for climate-data analysis problems. -
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Universal Java Matrix Package
sparse and dense matrix, linear algebra, visualization, big data
The Universal Java Matrix Package (UJMP) is an open source Java library which provides sparse and dense matrix classes, as well as a large number of calculations for linear algebra such as matrix multiplication or matrix inverse. Operations such as mean, correlation, standard deviation, replacement of missing values or the calculation of mutual information are supported, too. The Universal Java Matrix Package provides various visualization methods, import and export filters for a large... -
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circlize
Circular visualization in R
circlize is an R package for creating circular visualizations (plots laid out in circular coordinate systems) in a very flexible way. It implements many types of plots using circular layouts: chord diagrams, circular heatmaps, arcs/links between sectors, genomic data visualization, etc. It provides low-level drawing functions as well as high-level functions to build complex visualizations. It’s often used in genomics, network analysis, or other fields where relationships among categories or entities can be nicely displayed in a circular fashion. Support for circular heatmaps, multiple tracks (rings), for showing multiple layers of data per sector. ... -
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ipcvis
Visualize Inter Process Communication
Small python script that can visualize Inter Process Communication on Linux. It can create a graph of TCP and Unix sockets, pipes and also process hierarchy. Short (59 sec) demo visualizing ssh client connecting to ssh server on the same Ubuntu host: http://youtu.be/8XFKwzkexQY Longer (2 min 13 sec) demo visualizing ZoneMinder surveillance solution operation (stopping, starting, enabling and viewing camera): http://youtu.be/kM7klE61Ibk Tested on Ubuntu 14.10 and Debian... -
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Nagios is a plugin designed to send alerts based on the identification of objects or faces your server using computer vision and a simple webcam.
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TinkerCell is a software for synthetic biology. The visual interface allows users to design networks using various biological "parts". Models can include modules and multiple cells. Users can program new functions using C or Python. www.tinkercell.
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Python Open Source Echosounder Toolkit
real-time visualization of network data broadcasts from echosounders
During acoustic surveys of marine ecosystems, fisheries scientists need to quickly interpret large amounts of echosounder data and decide whether and where to sample for targeted organisms. The Python Open Source Echosounder Toolkit (pyOSET) was designed to facilitate this process by providing near real-time visualization of network data broadcasts from multiple echosounder systems, and to serve as a framework for implementation of algorithms to detect, locate, and identify fish or the seabed. ... -
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iSBatch
Hyearchical Data Processing Plugin for ImageJ
iSBatch is a Java-based plugin for ImageJ (version 1.49d) or its distribution Fiji. iSBatch is designed for quick evaluation of analysis pipelines and visual exploration of datasets. It is distributed under an open open-source license (GNU General Public License, version 3). The plugin handles the data in a hierarchical fashion based on a source folder containing all data and little guidance provided by the user. The software is designed for rapid exploration of large datasets and... -
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This is a sophisticated & integrated simulation and analysis environment for dynamical systems models of physical systems (ODEs, DAEs, maps, and hybrid systems). It supports symbolic math, optimization, continuation, data analysis, biological apps...
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PetaVision
Accelerated Open-Source Neuromorphic Computing
///////// NOTICE We have migrated to GitHub: https://petavision.github.io To clone an updated repository of the PetaVision codebase, please go to our page on GitHub. ///////// PetaVision is an open source, object oriented neural simulation toolbox optimized for high-performance multi-core, multi-node computer architectures. PetaVision is intended for computational neuroscientists who seek to apply neuromorphic models to hard signal processing problems; both to improve on the... -
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DSAquire
Data aquasition software for Thurlby DSA524
DSAquire allows you to download and plot trace data from a Thurlby DSA524 digital storage adaptor (it's a 25 year old instrument, but better late than never, eh?). The data is downloaded via an RS232 serial link using a null modem cable. You can export the plot as an image or export the data in real-world units as a csv file. This software runs under Linux and also under Windows XP and later using Cygwin. Pre-compiled binaries are supplied, as are full sources under the GPL. The... -
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Library of various Java Swing user interface components, with emphasis on views and editors for complex data structures, like collections, sets, lists, maps, graphs, and matrices.
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BioImageXD - free open source software for analysis, processing and 3D rendering of multi dimensional, multi data channel, time series image data from microscopy and other sources.
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Pyxplot
Graph Plotting Package and Scientific Scripting Language
Pyxplot is a scientific scripting language, graph plotting tool and vector graphics suite. It runs in a command-line environment under Linux, Mac OS X, and other POSIX systems. -
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MindRaider
MindRaider is a personal notebook and outliner.
MindRaider is a personal notebook and outliner. Where do you keep private remarks like ideas, plans, gift tips and howtos? Loads of documents and remarks spread around the file system? Can you find a remark when you need it? No? Try MindRaider! -
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MSCViewer
A tool for visualization and analysis of logs as sequence diagrams
MSCViewer is a tool intended for debugging of control flows in concurrent, distributed systems. The tool loads logs generated by various entities in the system and visualize a sequence diagram chart for events and interactions. The diagram is fully interactive: entity can be added/removed from the diagram and shuffled; events can be filtered, searched, highlighted and annotated with comments. MSCViewer features integration with a Python interpreter which allows writing Python scripts... -
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wspa
Web Scanning Probe Analysis - a web-based tool for SPM data processing
Web Scanning Probe Analysis - a web-based tool for data from SPM (STM, AFM), based on gnudatalanguage. - web-based interface for data management and processing - multiple data formats supported (GXSM, WSXM, Omicron SCALA, Createk) - unified, editable filtering of images, highly versatile -
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Code base for storing flight information, rendering paths on a zoomable world map and calculating statistics, used to run OpenFlights.org.
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Ctrl_GraphWindow
C# fully live user configurable chart control
Chart display control featuring various graphical exploitation options (zooms, cursor, statistics) fully configurable by the application end user run time Your feedback values for us, so add a review! -
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GraspIt
A simulator for robotic hands.
A simulator for robotic hands. This repository still contains the (somewhat outdated) releases and user manual. For the latest source code (recommended) please go to https://github.com/graspit-simulator -
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PanelCheck is an easy-to-use software tool for visualization of sensory profiling data using different types of plots. The joint information from the implemented plots provide detailed insight into assessor and panel performance.
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MicrobeGPS
The Explorative Taxonomic Profiling Tool for Metagenomic Data
MicrobeGPS is a bioinformatics tool for the analysis of metagenomic sequencing data. The goal is to profile the composition of metagenomic communities as accurately as possible and present the results to the user in a convenient manner. One main focus is reliability: the tool calculates quality metrics for the estimated candidates and allows the user to identify false candidates easily. -
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GWT Highcharts is a freely available open source library that provides an elegant and feature complete approach for including Highcharts and Highstock visualizations within a GWT application using pure Java code. Note: the source code for this project is now being maintained on GitHub here: https://github.com/squinn/gwt-highcharts
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scipion-xmipp
Image processing framework to integrate EM software packages.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated... -
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ProBez
Projections of Bezier curves
Interface to manipulate with 3d gragic,s reading initial data fron an XML file, created by user which represents 3d model and saves data in vectorized format.