Search Results for "python tool" - Page 2

This tool generates timing diagrams for documenting hardware design. It reads the description from a text file with a simple syntax. It generates vector graphic (EPS, SVG or EMF format). It can be used in command line mode or with a GUI. It is written in Python and works on any platform.

Clustergrammer is a visualization library built using D3.js that enables intuitive interaction with high-dimensional data. Clustergrammer was built with biological data in mind. Clustergrammer is a web-based tool for visualizing high-dimensional data (e.g. a matrix) as an interactive and shareable hierarchically clustered heatmap. Clustergrammer's front end (Clustergrammer-JS) is built using D3.js and its back-end (Clustergrammer-PY) is built using Python. Clustergrammer produces highly interactive visualizations that enable intuitive exploration of high-dimensional data and has several biology-specific features (e.g. enrichment analysis, see Biology-Specific Features) to facilitate the exploration of gene-level biological data.

Visualize and analyze 3D data files using 2D colorplots. Inspired by spyview. Written in python.

...MSCViewer features integration with a Python interpreter which allows writing Python scripts interacting with the model. This powerful feature can be used to automate validatation of distributed control flows, integrate with graphing infrastructure, etc.

MicrobeGPS is a bioinformatics tool for the analysis of metagenomic sequencing data. The goal is to profile the composition of metagenomic communities as accurately as possible and present the results to the user in a convenient manner. One main focus is reliability: the tool calculates quality metrics for the estimated candidates and allows the user to identify false candidates easily.

PanelCheck is an easy-to-use software tool for visualization of sensory profiling data using different types of plots. The joint information from the implemented plots provide detailed insight into assessor and panel performance.

ADOMA stands for: Alternative Display Of Multiple Alignment. ADOMA can create four different displays of a multiple sequence alignment: a ClustalW alignment in HTML format, a simplified ClustalW alignment in HTML and/or txt format and a colored ClustalW alignment in HTML format. For examples of these outputfiles check the screenshots. ADOMA uses ClustalW to create the multiple alignment from DNA or protein sequences and displays them slightly different than the normal output of ClustalW....

MicroView is a 2D/3D image viewer and analysis tool. It is written in Python and uses VTK for all of its graphical capabilities.

NanoCap is a generic application for the construction of low energy fullerene and capped nanotube structures. It provides an ideal tool to accompany the study of finite carbon molecules using computer simulation. The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the structure generation routines into pre-existing code.

COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS...

Plotmeister is a data exploration tool. It parses your ASCII data and generates a simple (text-based) table format. You can modify this table and eventually create nice looking figures.

SloppyPlot is a tool to import scientific datasets and create 2D plots from this data. There is a gnuplot postscript export available.

Tool for annotating (bike race) videos with data from GPS devices to display time, distance, speed, power, HR, CAD, elevation, laps. Outputs a series of SVG files importable as image sequence into the OpenShot Video editor as overplayed video track.

OpenPIV is an initiative of scientists to develop a software, algorithms and methods for the state-of-the-art experimental tool of Particle Image Velocimetry (PIV) which are free, open source, and easy to operate.

Metropolis is a visualization tool for TRANSIMS traffic simulation output. It specializes in viewing the dynamic outputs of the micro-simulator, such as vehicle motion and other time-varying data.

A tool for visualization, classification, and quantification of three-dimensional secondary ion mass spectrometry data.

This is a neat little tool to visualize binary data in a graphical form. It's really interesting to look at different types of files.

Garmon (Gnome/GTK+ Car Monitor) is a tool that lets you connect to an OBD-II compliant vehicle using an ELM327 based scanning device. It supports monitoring live and freeze frame data as well as reading and clearing DTCs. It is written in python.

Manage multiple connections to the OpenDX executive. This allows gateway programs like apache/php or apache/python to create dynamic content for web pages based on visualizations created using the OpenDX tool.

pyLastFM graph is commandline tool for creating a nice looking graph time graph from Last.fm profile data. It uses the audioscrobbler.net XML interface and can create very high resolution output images.

A 3D data visualization tool, specializing in the display of robotically collected point, range, and volumetric data. Provides a very flexible framework for different file formats and visualization parameters.

VisIt is an interactive parallel visualization and graphical analysis tool for viewing scientific data.

This is a tool to organize and present complex, interrelated ideas visually in different ways. It aims to be many tools all at the same time -- outliner, mindmapping and concept mapping tool, PIM, project manager and tracker, literate programming editor,

Python library and command line tool to generate maps in PDF format an place objects on them.

A GUI built using Python 2.3+, wxPython and PyOpenGL for the mathematical modeling and visualization of landscape and streamflow systems. This visualization tool uses the Channel-Hillslope Integrated Landscape Development (CHILD) model as its backend.