Showing 185 open source projects for "2d"

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  • 1
    MCE - Marching Cube ELD

    MCE - Marching Cube ELD

    Crystallographic software for displaying voxel maps - electron density

    MCE is an crystallographic experimental program for 3D and 2D electron density map visualization. The software is mainly focused on visualization of ELD calculated from X-ray diffraction data of small molecules, but it will work for small proteins as well. Download the installation file (default download) or find in "Files" the zip-file with instant copy of the program which does not require the installation.
    Downloads: 1 This Week
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  • 2
    ReViMS

    ReViMS

    ReViMS, a 3D volume rendering tool for light-sheet/confocal microscopy

    Reconstruction and Visualization from Multiple Sections (ReViMS), an open-source, user-friendly software for automatically estimating volume and several other features of 3D multicellular aggregates (i.e., cancer spheroid, zebrafish, fruit fly). ReViMS requires a z-stack of 2D binary masks, obtained by segmenting a sequence of fluorescent images acquired by scanning the aggregate along the z axis, using a confocal or a light-sheet fluorescent microscope. It provides a number of tools for: (a) segmenting z-stacks of fluorescence images; (b) reconstructing the 3D surface of the aggregates and estimating several features (including the volume). ...
    Downloads: 0 This Week
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  • 3

    libsombrero

    Astronomical object/structure detection from 1D and 2D data sets.

    Sombrero is a fast wavelet image processing and object detection C library for astronomical images. Sombrero is named after the "Mexican Hat" shape of the wavelet masks used in image convolution and is released under the GNU LGPL library.
    Downloads: 0 This Week
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  • 4
    Mjograph is an XY (2D) graph editor that runs on Mac OSX and Java with the goal to provide researchers with a quick way to visualize numerical data and also create publication-quality plots.
    Downloads: 4 This Week
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  • 5
    TurboVNC

    TurboVNC

    High-speed, 3D-friendly, TightVNC-compatible remote desktop software

    ...TurboVNC forked from TightVNC in 2004 and still covers all of the TightVNC 1.3.x features, but TurboVNC contains numerous feature enhancements and bug fixes relative to TightVNC, and it compresses 3D and video workloads much better than TightVNC while using generally only 5-20% of the CPU time of the latter. Using non-default settings, TurboVNC can also be made to compress 2D workloads as "tightly" as TightVNC.
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    Downloads: 127,438 This Week
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  • 6
    VectreViewer: A vector-based file viewer

    VectreViewer: A vector-based file viewer

    A Windows-based viewer currently supporting CDR & 2D DXF files

    This is a Windows-based wireframe viewer currently designed for CDR & 2D R12 DXF files. The DXF renderer supports arcs, circles, lines and polylines. Support for SVG files is coming shortly. Go here to check for updates: https://www.vvwr.net
    Downloads: 1 This Week
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  • 7
    TexGen
    TexGen is a geometric textile modelling software package to be used for obtaining engineering properties of woven textiles and textile composites. Citing TexGen We would be grateful if you could acknowledge use of TexGen where appropriate and suggest using one of the following references: L P Brown and A C Long. "Modelling the geometry of textile reinforcements for composites: TexGen", Chapter 8 in "Composite reinforcements for optimum performance (Second Edition)", ed. P Boisse,...
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    Downloads: 133 This Week
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  • 8
    GraceGTK

    GraceGTK

    Draw curves, colored 2D maps with CAD capabilities

    GraceGTK features: Import numerical data to draw curves or colored 2D maps with level contour lines Transform data (Fourier, wavelets), apply filters, fit curves Interactive GUI with CAD capabilities to add drawings Commands interpreter to automate work More details in Files/doc/GraceGTK.pdf file GraceGTK was forked from grace-5.1.22 in 2009. The enhanced commands interpreter has an ascending compatibility with old Grace scripts.
    Downloads: 0 This Week
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  • 9
    DataMelt

    DataMelt

    Computation and Visualization environment

    ...This Java multiplatform program is integrated with several scripting languages such as Jython (Python), Groovy, JRuby, BeanShell. DMelt can be used to plot functions and data in 2D and 3D, perform statistical tests, data mining, numeric computations, function minimization, linear algebra, solving systems of linear and differential equations. Linear, non-linear and symbolic regression are also available. Neural networks and various data-manipulation methods are integrated using powerful Java API. Elements of symbolic computations using Octave/Matlab scripting are supported.
    Downloads: 5 This Week
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  • 10
    GXSM

    GXSM

    Scanning Probe Microscopy Controller and Data Visualization Software

    GXSM -- Gnome X Scanning Microscopy: A multi-channel image and vector-probe data acquisition and visualization system designed for SPM techniques (STM,AFM..), but also SPA-LEED/LEED/LEEM data analysis. A plug-in interface allows any user add-on data-processing and special hardware and instrument support. Latest: NC-AFM and related explorative methods as SQDM can be configured. High-Speed external PAC-PLL hardware option with digital DSP link. Based on several hardware options it supports...
    Downloads: 0 This Week
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  • 11
    rayshade-mathematica

    rayshade-mathematica

    rayshade and POV for Mathematica Export + view

    Beautifully Render* your Graphic3D and Shown or Manipulate right in the Front End (without Export to, ie 3DStudio Art Renderer, et al). For use with Mathematica 4.0 - 13.1. Makes file.ray or .pov that will look much like image in notebook except rendered. Works easily/automatically with many Graphics3D (and some Graphic) as well. However graphics in 13.1 is too big to comment on: many will work many not. Has many options to fix renders that aren't so auto. Now very portable...
    Downloads: 0 This Week
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  • 12
    QuickPlot

    QuickPlot

    Simple user interface for gnuplot aimed for reflectometry data

    Graphical user interface for gnuplot to create publication quality figure very quickly. It supports templates for fast formatting of graphics, different plot styles, insets, axis and label options. One important feature is storing metadata in png and pdf files that can be used to reload any graph saved with QuickPlot.
    Downloads: 0 This Week
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  • 13
    ReViSP

    ReViSP

    ReViSP, a 3D volume rendering MATLAB tool for multicellular spheroids

    ...Requirements for running ReViSP from the source code: MATLAB 2020a and Image Processing Toolbox 11.1 or later versions. Please, when using this software, cite these articles: (a) F. Piccinini, et al., Cancer multicellular spheroids: Volume assessment from a single 2D projection. Computer Methods and Programs in Biomedicine, 118(2):95–106, 2015. (b) F. Piccinini, et al., Single-image based methods used for non-invasive volume estimation of cancer spheroids: a practical assessing approach based on entry-level equipment. Computer Methods and Programs in Biomedicine, 135:51-60, 2016.
    Downloads: 2 This Week
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  • 14
    giza

    giza

    A scientific plotting library for C/Fortran built on cairo

    A 2D scientific plotting library built on cairo. Provides uniform output to pdf, ps, png and X-Windows. Written in C with no dependencies (other than cairo) as a direct replacement for PGPLOT.
    Downloads: 2 This Week
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  • 15
    AlphaPlot

    AlphaPlot

    Interactive scientific graphing and data analysis software.

    Alpha Plot can generate different types of 2D and 3D plots (such as line, scatter, bar, pie, and surface plots) from data that is either imported from ASCII files, entered by hand, or calculated using formulas. The data is held in spreadsheets which are referred to as tables with column-based data (typically X and Y values for 2D plots) or matrices (for 3D plots). The spreadsheets as well as graphs and note windows are gathered in a project and can be organized using folders. ...
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    Downloads: 32 This Week
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  • 16
    robot-monitor-graphics

    robot-monitor-graphics

    Simple and quick 2D/3D graphics engine for simulation.

    Simple and quick 2D/3D graphics rendering engine with the aim for making robotic simulations. Loads 2D/3D model files and texture files and easily control the pose and appearance of those 2D/3D objects. Lighting and shadow mapping are done in back-end processes. Performance is smooth since rendering engine uses shader programs and GPU power. The project uses OpenGL API and other external open source packages like GLFW and wxWidgets and is made a cross-platform API.
    Downloads: 0 This Week
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  • 17
    Jupyter Dock

    Jupyter Dock

    Perform molecular docking protocols interactively

    Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results. These notebooks are Python 3 compatible. Each protocol and Jupyter notebook has its own test folder for testing and reproducibility evaluation. For all notebooks, the demonstration includes the use of AutoDock Vina and Ledock. When available, some alternatives are mentioned in the protocol. Jupyter Dock's initial goal...
    Downloads: 0 This Week
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  • 18

    coDDMaker

    distributions and co-distribution 2D signal analysis

    coDDMaker is a MATLAB® App Designer's software program for the guided analysis of the distributions and co-distribution of marker pairs in 2D image.
    Downloads: 0 This Week
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  • 19
    DDMaker

    DDMaker

    Local Distribution Density Map Maker

    DDMaker perform local density analysis and generates pseudocolor maps of the spatial distribution of imaged cellular structures in 2D images, starting from either RGB color, grey level or binary images. DDMaker local density analysis permit to selectively denoise the signal, visualize and quantify its distribution and threshold the image basing on local density.
    Downloads: 0 This Week
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  • 20
    Graph Capture

    Graph Capture

    Fast 2D charting from raw data

    The software was designed for suitable chart creation. From text files or programs, that haven't visual charts themselves, data is passed to "Graph Capture" and plotted there. But you have to write Perl RegEx expressions to extract X and Y-values from raw data. Otherwise, you can request suitable filter templates here https://www.facebook.com/vlad.dubov.77. For making RegEx expressions short docs are also included in the program. You can find "Help: regular expressions in Perl" in the...
    Downloads: 0 This Week
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  • 21
    NOVA

    NOVA

    Analysis and visualization of complexome profiling data.

    NOVA is a program designed to analysis complexome profiling data (Heide et al., 2012). A graphical user interface (GUI) provides various visualization tools, such as heat maps and 2D plots. Several hierarchical clustering algorithms (e.g., single linkage, average linkage, Wards linkage), different distance measures (e.g., Euclidean distance, Manhattan distance, Pearson distance), and various normalization techniques are implemented. Many additional functions like zooming, searching for proteins, image export, and automatic file format recognition support intuitive handling for biologists. ...
    Downloads: 5 This Week
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  • 22
    GEOMS2

    GEOMS2

    Geostatistics and geosciences modeling software

    GEOMS2 is a geostatistics and geosciences modeling software. Provides interface for grid (mesh), point, surface and data (non-spatial) objects. It has a 3D viewer and 2D plots using the well known Python engines Mayavi and Matplotlib. It has several functions to manipulate your data as well as provide univariate and multivariate analysis. NOTE: The software is still an early beta. Please tell us if you found a bug. Download datasets for students of Geostatistics 2017 (Petroleum Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Petroleum.zip/download Download datasets for students of Geostatistics 2017 (Geology and Mining Engineering): https://sourceforge.net/projects/geoms2/files/Geostatistics_Mining.zip/download Old: http://sourceforge.net/projects/geoms2/files/SETS_geoestatistica2_2015.7z/download https://sites.google.com/site/cmrpsoftware/downloads/Quarry_sets.7z?...
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    Downloads: 11 This Week
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  • 23
    SIVIC
    SIVIC is an open-source, standards-based software framework and application suite for processing and visualization of DICOM MR Spectroscopy data. Through the use of DICOM, SIVIC aims to facilitate the application of MRS in medical imaging studies.
    Downloads: 4 This Week
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  • 24
    MoCalc2012

    MoCalc2012

    GUI for MOPAC, DFTB+, GAMESS, Firefly, NWChem, ORCA and PSI4

    MoCalc2012 is a simple, efficient Graphical User Interface for MOPAC, DFTB+, GAMESS(US), Firefly, NWChem, ORCA and PSI4.
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    Downloads: 11 This Week
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  • 25
    JointTrack Auto
    Please see https://github.com/BRIO-lab/Joint-Track-Machine-Learning for the latest version of the JointTrack/JointTrack Auto lineage.
    Downloads: 0 This Week
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