Showing 4 open source projects for "mapping"

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  • 1

    MOIRAI

    Simple Scientific Workflow System for CAGE Analysis

    Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data. ...
    Downloads: 9 This Week
    Last Update:
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  • 2
    DNAA is the DNA analysis package, for analyzing next-generation post-alignment whole genome resequencing data. Specifically, DNAA is able to find structural variation, SNP and indel variants, as well as evaluating the mapping and data quality.
    Downloads: 0 This Week
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  • 3

    Arthropod Easy Capture

    An arthropod specific, specimen level data capture application

    ...The AEC community, as part of the Advancing Digitization of Biodiversity Collections (ADBC) program, is already tasked to develop the appropriate Web service for sharing data with the iDigBio data portal. This includes the application of Globally Unique Identifiers (GUIDs) for specimens, and mapping relevant data fields to DarwinCore. iDigBio is the aggregator for all of the ADBC Thematic Collection Network projects, including trophic level interaction data from the Tri-Tropic Interactions TCN.
    Downloads: 2 This Week
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  • 4
    Toolsverse ETL Framework

    Toolsverse ETL Framework

    Open source Extract Transform Load engine written in Java

    ...Key Features: * embeddable, open source and free * fast and scalable * uses target database features to do transformations and loads * manual and automatic data mapping * data streaming * bulk data loads * data quality features using SQL, JavaScript? and regex * data transformations Requirements * Java 1.6 and up * At least 4 MB of RAM New in 3.2 (01/18/2013) * Improved auto-update functionality * Bug fixes
    Downloads: 0 This Week
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    BoldTrail Real Estate CRM

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