Open Source Data Quality Tools - Page 2
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Data Quality Tools
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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re_data
re_data - fix data issues before your users & CEO would discover them
re_data is an open-source data reliability framework for the modern data stack. Currently, re_data focuses on observing the dbt project (together with underlying data warehouse - Postgres, BigQuery, Snowflake, Redshift). Gather all relevant outputs about your data in one place using our cloud. Invite your team and debug it easily from there. Go back in time, and see your past metadata. Set up Slack notifications to always know when a new report is produced or an existing one got updated. -
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ydata-profiling
Create HTML profiling reports from pandas DataFrame objects
ydata-profiling primary goal is to provide a one-line Exploratory Data Analysis (EDA) experience in a consistent and fast solution. Like pandas df.describe() function, that is so handy, ydata-profiling delivers an extended analysis of a DataFrame while allowing the data analysis to be exported in different formats such as html and json. -
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Open Source Data Quality and Profiling
World's first open source data quality & data preparation project
This project is dedicated to open source data quality and data preparation solutions. Data Quality includes profiling, filtering, governance, similarity check, data enrichment alteration, real time alerting, basket analysis, bubble chart Warehouse validation, single customer view etc. defined by Strategy. This tool is developing high performance integrated data management platform which will seamlessly do Data Integration, Data Profiling, Data Quality, Data Preparation, Dummy Data Creation, Meta Data Discovery, Anomaly Discovery, Data Cleansing, Reporting and Analytic. It also had Hadoop ( Big data ) support to move files to/from Hadoop Grid, Create, Load and Profile Hive Tables. This project is also known as "Aggregate Profiler" Resful API for this project is getting built as (Beta Version) https://sourceforge.net/projects/restful-api-for-osdq/ apache spark based data quality is getting built at https://sourceforge.net/projects/apache-spark-osdq/ -
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CloverDX
Design, automate, operate and publish data pipelines at scale
Please, visit www.cloverdx.com for latest product versions. Data integration platform; can be used to transform/map/manipulate data in batch and near-realtime modes. Suppors various input/output formats (CSV,FIXLEN,Excel,XML,JSON,Parquet, Avro,EDI/X12,HL7,COBOL,LOTUS, etc.). Connects to RDBMS/JMS/Kafka/SOAP/Rest/LDAP/S3/HTTP/FTP/ZIP/TAR. CloverDX offers 100+ specialized components which can be further extended by creation of "macros" - subgraphs - and libraries, shareable with 3rd parties. Simple data manipulation jobs can be created visually. More complex business logic can be implemented using Clover's domain-specific-language CTL, in Java or languages like Python or JavaScript. Through its DataServices functionality, it allows to quickly turn data pipelines into REST API endpoints. The platform allows to easily scale your data job across multiple cores or nodes/machines. Supports Docker/Kubernetes deployments and offers AWS/Azure images in their respective marketplace -
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Restful APIs for Data Cleansing
This is sister project for osDQ which provide Restful APIs
(Beta Version) This is sister project for https://sourceforge.net/projects/dataquality/ . It provides Restful APIs for features for data quality and data preparation features. This project will help projects which want embed data quality and data preparation features in their project or UI using restful calls. Data Cleansing APIs Dockerfile: # Pull base image FROM frnde/jetty-9.4.2-jre8-alpine-cet ADD osdq-v0.0.1.war /var/lib/jetty/webapps/osdq.war EXPOSE 8080 Docker Image https://hub.docker.com/r/vreddym/osdq-web/tags -
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MOIRAI
Simple Scientific Workflow System for CAGE Analysis
Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data. MOIRAI has a graphical interface allowing wet-lab researchers to create, modify and run analysis workflows. Embedded within the workflows are graphical quality control indicators allowing users assess data quality and to quickly spot potential problems. MOIRAI package comes with three main workflows allowing users to map, annotate and perform an expression analysis over multiple samples. -
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Medrechaincode
Lifetime medical records in decentralized chain code-network
Medrechaincode uses a blockchain technology to store patient life time medical records in decentralized node with single true version of patient medical records” Medrechaincode provides a consensus based access of patient medical record to different healthcare professionals like R&D labs, doctors, hospital & pharmacist. This platform will also help the healthcare professional to use integrated data quality tool to remove duplicity of patient records , profiling of medical records, metadata discovery , data cleansing , classification of medical records, bucketization, anomaly discovery to find out the anomalous trend of medical records. m This platform will help patient to reduced their consultation time, monetize their medical records, for labs to get the historical records & come up with new medicine and make a clinical trial. -
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apache spark data pipeline osDQ
osDQ dedicated to create apache spark based data pipeline using JSON
This is an offshoot project of open source data quality (osDQ) project https://sourceforge.net/projects/dataquality/ This sub project will create apache spark based data pipeline where JSON based metadata (file) will be used to run data processing , data pipeline , data quality and data preparation and data modeling features for big data. This uses java API of apache spark. It can run in local mode also. Get json example at https://github.com/arrahtech/osdq-spark How to run Unzip the zip file Windows : java -cp .\lib\*;osdq-spark-0.0.1.jar org.arrah.framework.spark.run.TransformRunner -c .\example\samplerun.json Mac UNIX java -cp ./lib/*:./osdq-spark-0.0.1.jar org.arrah.framework.spark.run.TransformRunner -c ./example/samplerun.json For those on windows, you need to have hadoop distribtion unzipped on local drive and HADOOP_HOME set. Also copy winutils.exe from here into HADOOP_HOME\bin -
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DNAA is the DNA analysis package, for analyzing next-generation post-alignment whole genome resequencing data. Specifically, DNAA is able to find structural variation, SNP and indel variants, as well as evaluating the mapping and data quality.
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MentDB Projects
Generalized Interoperability and Strong AI
MentDB is an open-source platform driving research into next-generation AI and universal data exchange. Our architecture is built around the revolutionary Mentalese Query Language (MQL). MentDB Weak (Generalized Interoperability): A unified data layer enabling seamless data exchange and application integration (SOA, ETL, Data Quality). We eliminate data silos through a single, generalized data language. MentDB Strong (Strong AI / AGI): The framework for exploring and building Machine Consciousness, free will, and advanced ethical reasoning systems. Based on new-generation AI algorithms. -
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SolexaQA is a software to calculate quality statistics and visual representations of data quality for second-generation sequencing data.
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BMDExpress Data Viewer
A Visualization Tool to Analyze BMDExpress Datasets
Regulatory agencies increasingly apply benchmark dose (BMD) modeling to determine points of departure for risk assessment. BMDExpress applies BMD modeling to transcriptomic datasets to identify transcriptional BMDs. However, graphing and analytical capabilities within BMDExpress are limited, and the analysis of output files is challenging. We developed a web-based application, BMDExpress Data Viewer for visualizing and graphing BMDExpress output files. BMDExpress Data Viewer is a useful tool to visualize, explore and analyze BMDExpress output files. Visualizing the data in this manner enables rapid assessment of data quality, model fit, doses of peak activity, most sensitive pathway perturbations and other metrics that will be useful in applying toxicogenomics in risk assessment. Tool Link: http://apps.sciome.com:8082/BMDX_Viewer/ Publication Link: http://onlinelibrary.wiley.com/doi/10.1002/jat.3265/abstract -
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Parse, analyze and -- most importantly -- use COBOL data definitions. This gives you access to COBOL data from Python programs. Write data analyzers, one-time data conversion utilities and Python programs that are part of COBOL systems. Really.
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EZStacking
EZStacking is Jupyter notebook generator for machine learning
EZStacking is Jupyter notebook generator for supervised learning problems using Scikit-Learn pipelines and stacked generalization. EZStacking handles classification and regression problems for structured data. It can also be viewed as a development tool, because a notebook generated with EZStacking contains: -an exploratory data analysis (EDA) used to assess data quality - a modelling producing a reduced-size stacked estimator - a server returning a prediction, a measure of the quality of input data and the execution time. -
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Muse: Middleware Universal Scripting idE
Automate: WebSphere; WebLogic; JBoss; Glassfish; Tomcat; Linux, WinRM
Simplify... Aggregate... Automate... Simplify... *** OPEN SOURCE - GPL3/EPL. Use Python / Jython to automate WebSphere, WebLogic, JBoss, Glassfish and Tomcat Middleware Estates over JMX, both SSL and non-SSL + Linux SSH (agent-less) + WinRM Target all 5 servers, Linux and WinRM from the same workspace. Familiar Eclipse based Jython and Python Development IDE, pre-configured and ready to go. 4-Click Installer. Win x64, Linux WINE x64. Built-In JVM. Java 8/9/10, Amazon Corretto, JETPack13/14/16, IBM SDK Compatible. *** Now with powerful JBoss / GlassFish / Tomcat / Linux Active Auditing Framework. Tomcat / Glassfish 2 Python - Configuration Snapshots *** Infrastructure-as-Code, Code-Writing-Code Designed to Run on JETPack: https://sourceforge.net/projects/jetpack Muse.2026.03.x - Win 10 / Win11 / Linux (WINE) Muse.2025.12.x - Win8 / Win 10 / Win11 / Linux (WINE) -
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methylQA
methylation sequence data quality assessment tool
methylation sequence data quality assessment tool -
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PrepMS is a simple-to-use graphical application for MS data preprocessing, peak detection, and visual data quality assessment. PrepMS is a compiled stand-alone application. Project homepage: http://stat.tamu.edu/~yuliya/prepMS.html
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Toolsverse ETL Framework
Open source Extract Transform Load engine written in Java
ETL Framework is a standalone Extract Transform Load engine written in Java. It includes executables for all major platforms and can be easily integrated into other applications. Key Features: * embeddable, open source and free * fast and scalable * uses target database features to do transformations and loads * manual and automatic data mapping * data streaming * bulk data loads * data quality features using SQL, JavaScript? and regex * data transformations Requirements * Java 1.6 and up * At least 4 MB of RAM New in 3.2 (01/18/2013) * Improved auto-update functionality * Bug fixes -
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AMB New Generation Data Empowerment - offers a comprehensive approach to data governance needs with ground breaking features to locate, identify, discover, manage and protect your overall data infrastructure. Repeatable Process/Exposed Repository.
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Arthropod Easy Capture
An arthropod specific, specimen level data capture application
Arthropod Easy Capture (AEC) is an arthropod specific, open-source solution for handling specimen level host interactions. Developed in conjunction with the Plant Bugs Planetary Biodiversity, Tri-Tropic Interactions TCN, and Bee Database projects, AEC is designed for rapid, and accurate data capture, utilizing controlled vocabularies to maintain data quality. The application is Web-based, allowing for collaboration from multiple partners to a centralized, easily maintainable, database. The AEC community, as part of the Advancing Digitization of Biodiversity Collections (ADBC) program, is already tasked to develop the appropriate Web service for sharing data with the iDigBio data portal. This includes the application of Globally Unique Identifiers (GUIDs) for specimens, and mapping relevant data fields to DarwinCore. iDigBio is the aggregator for all of the ADBC Thematic Collection Network projects, including trophic level interaction data from the Tri-Tropic Interactions TCN. -
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Web-GUI for a benchmarking database which is based on the EFQM Framework for Corporate Data Quality Management.
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EPRI Open PQ Dashboard
Demos new techniques for extracting information from PQ data files
Open PQ Dashboard version 1.0 provides visual displays to quickly convey the status and location of power quality (PQ) anomalies throughout the electrical power system. Summary displays starts with the choice of a geospatial map-view or annunciator panel, both with unique visualizations for across-the-room visualizations fit for a PQ operations center. Drill-downs are in place for various statistics and guide users all the way down to the waveform level. This version consist of a few proof-of-concept applications of applying event severity and trend values to heatmap displays—giving the PQ engineers a wide-area status of PQ for quick interpretation. Data quality has been added so users can quickly see when meters are providing incomplete or invalid data. This dashboard currently accepts power quality data from COMTRADE and PQDIF standard file formats. Other proprietary software interfaces have been added. See the installation manual for more details. -
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ETS Offers iClassicMDM - MDM Software
iClassicMDM offered by ETS is a Master Data Platform for all.
We are living at an age where homes are becoming offices, and every offices need better data management tool, data management issues are spiraling. Our passion is to offer affordable data management tools to individuals and enterprises of all size. iClassicMDM is a Master Data Management application that can run on desktop, web server or containers. It allows customers to create data model as per their business needs & expose them for collaboration through a Data Stewardship User Interface & Restful API to exchange data across the ecosystem. It has built in Data Modeler, Databases, Data Quality - Cleanse & Match, Data Flow studio & Data store to accelerate the turn around time. Our customers can use the product for evaluation and once they are satisfied, they can reach out to us for pricing before go-live. We are recognized by Gartner since 2016. Contact us at info@etsondemand.com or visit www.etsondemand.com to download the software. -
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The Functional Genomics Data Society develops standards for biological research data quality, annotation and exchange. We define minimum information specs and create software that builds on these, helping scientists annotate and share data easily.
