Showing 86 open source projects for "python tool"

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  • 1
    MicrobeGPS

    MicrobeGPS

    The Explorative Taxonomic Profiling Tool for Metagenomic Data

    MicrobeGPS is a bioinformatics tool for the analysis of metagenomic sequencing data. The goal is to profile the composition of metagenomic communities as accurately as possible and present the results to the user in a convenient manner. One main focus is reliability: the tool calculates quality metrics for the estimated candidates and allows the user to identify false candidates easily.
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  • 2
    PanelCheck is an easy-to-use software tool for visualization of sensory profiling data using different types of plots. The joint information from the implemented plots provide detailed insight into assessor and panel performance.
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    Downloads: 28 This Week
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  • 3
    MicroView
    MicroView is a 2D/3D image viewer and analysis tool. It is written in Python and uses VTK for all of its graphical capabilities.
    Downloads: 8 This Week
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  • 4

    Data Migrator for Oracle

    Migrate/Copy your data between Oracle database and 13 major DBs.

    Command line data Copy/Migration tool for Oracle. Supports Oracle 7.3, Oracle 8i, Oracle 9i, Oracle 10G, Oracle 11G and 13 major databases. 1. Exadata 2. Sybase ASE 3. Informix Innovator C 4. Sybase SQL Anywhere 5. DB2 UDB 6. CSV 7. SQLServer 8. MariaDB 9. Sybase IQ 10. PostgreSQL 11. MySQL 12. Informix IDS 13. TimesTen
    Downloads: 0 This Week
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  • 5

    CSV*Loader PRO (Windows command line)

    Loads CSV file to14 databases

    Windows command line tool for CSV data load to 14 relational stores.
    Downloads: 0 This Week
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  • 6

    CSV*Extractor Pro (Windows command line)

    Spool you scalar data in CSV format from 14 major Databases.

    Command line tool for data export from major relational data stores (RDBMS). DB2 Advanced Enterprise Server DB2 Advanced Workgroup Server DB2 Developer Edition DB2 Enterprise Server DB2 Express DB2 Express C DB2 Workgroup Server Exadata Infobright Informix IDS Informix Innovator C MariaDB MySQL Oracle Oracle XE PostgreSQL SAP Sybase ASE SQL Lite SQL Server Enterprise SQL Server Express Sybase IQ Sybase SQL Anywhere TimesTen
    Downloads: 0 This Week
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  • 7
    Pathomx

    Pathomx

    Workflow-based data analysis built on IPython

    Pathomx is a workflow-based tool for the analysis and visualisation of experimental data. Initially created as a tool for metabolomic data analysis is has been extended and can now be used for any scientific and non-scientific data analysis.
    Downloads: 0 This Week
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  • 8

    Data Migration Tools for RDBMS

    DataMigrator for 14 major databases

    Touch and go Windows command line data migration tool for 14 databases: 1. Sybase ASE 2. Informix Innovator C 3. Sybase SQL Anywhere 4. DB2 UDB 5. SQLServer 6. MariaDB 7. Sybase IQ 8. PostgreSQL 9. MySQL 10. Informix IDS 11. TimesTen 12. Oracle 13. SQL Lite 14. Exadata
    Downloads: 0 This Week
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  • 9
    NanoCap

    NanoCap

    Carbon Fullerene and Capped Nanotube Generator

    NanoCap is a generic application for the construction of low energy fullerene and capped nanotube structures. It provides an ideal tool to accompany the study of finite carbon molecules using computer simulation. The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the structure generation routines into pre-existing code.
    Downloads: 3 This Week
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  • 10
    COV2HTML

    COV2HTML

    A visualization and analysis tool of Bacterial NGS data for Biologists

    COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS...
    Downloads: 0 This Week
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  • 11

    DataMule

    Extract-Copy-Load (ECL) tool for 14 databases.

    Extract, Copy and Load operations for: 1. Sybase ASE 2. Informix Innovator C 3. Sybase SQL Anywhere 4. DB2 UDB 5. SQLServer 6. MariaDB 7. Sybase IQ 8. PostgreSQL 9. MySQL 10. Informix IDS 11. TimesTen 12. Oracle 13. SQL Lite 14. Exadata Total 224 data copy vectors. CSV -> DB. DB->DB DB->CSV
    Downloads: 0 This Week
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  • 12

    DataCopy For SQLServer

    Data Copy tool for SQL Server and Oracle

    Migrate your data from SQLServer to Oracle without creating single dump file. Input is a SQLServer query file defining dataset you want to copy to Oracle. Target table has to exist for copy to go through. Turbo mode offers 5x copy performance improvement.
    Downloads: 0 This Week
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  • 13

    TabZilla

    Ad-hoc data replication for Oracle database.

    #FreeUkraine #SaveUkraine #StopRussia #StopPutin #CrimeaIsUkraine #UnitedForUkraine #RussiaInvadedUkraine UI written using wxPython. Allows you, to copy tables between Oracle databases using drag-n-drop interface. AKA filezilla, but for tables, not files.
    Downloads: 0 This Week
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  • 14

    BriPy

    A BRIC-seq data analysis package written in Python.

    ...It employs metabolic labeling by BrU of newly synthesized RNAs to chase chronological decreases of BrU-labeled RNA (Pulse-chase labeling), followed by immunoprecipitation with antibody for BrU, construction of cRNA library for High-throughput sequencing and computational data analysis. -What is BriPy? BriPy package is a BRIC-seq data analysis tool written in Python. It can calculate RNA half-life for each transcript and draw graphs describing the kinetics of RNA decay. In the future, it will provide several useful modules(e.g. calculating RPKM of each transcript from BAM file or ELAND output file). -Prerequisites To use BriPy package, you will need Python and the following extension packages. ...
    Downloads: 0 This Week
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  • 15

    Workshop resource manager

    Easy and fast tool for managing home workshop resources

    Storekeeper is small tool that helps you to keep an eye on your resources in home lab or workshop. It can be used in several places and, thanks to it's single-file and synchronize option, merge data between users.
    Downloads: 0 This Week
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  • 16
    Plotmeister is a data exploration tool. It parses your ASCII data and generates a simple (text-based) table format. You can modify this table and eventually create nice looking figures.
    Downloads: 0 This Week
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  • 17
    NLOPredict
    NLOPredict is a nonlinear optical prediction and data analysis tool. Nonlinear optical measurements can yield information about the structure of crystals, and orientation of molecules at surfaces and interfaces.
    Downloads: 0 This Week
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  • 18
    A tool that parses SQL Select statements and generates a diagram. The diagram shows parts of the underlying SQL directly in the diagram. For example x=30 , GROUP BY (year), HAVING MIN(age) > 18. It is easy to see cartesian joins and/or loops.
    Downloads: 0 This Week
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  • 19
    Open Source Particle Image Velocimetry

    Open Source Particle Image Velocimetry

    Open Source Particle Image Velocimetry and PIV Analysis

    OpenPIV is an initiative of scientists to develop a software, algorithms and methods for the state-of-the-art experimental tool of Particle Image Velocimetry (PIV) which are free, open source, and easy to operate.
    Downloads: 0 This Week
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  • 20
    A tool for autonomous and virtual topical data integration using the focused web-harvesting method.
    Downloads: 0 This Week
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  • 21
    Metropolis is a visualization tool for TRANSIMS traffic simulation output. It specializes in viewing the dynamic outputs of the micro-simulator, such as vehicle motion and other time-varying data.
    Downloads: 0 This Week
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  • 22
    A tool for visualization, classification, and quantification of three-dimensional secondary ion mass spectrometry data.
    Downloads: 0 This Week
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  • 23
    This is a neat little tool to visualize binary data in a graphical form. It's really interesting to look at different types of files.
    Downloads: 0 This Week
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  • 24
    SnapLogic is an Open Source Data Integration framework that combines the power of state-of-the-art dynamic programming languages with standard Web interfaces to solve today's most pressing problems in data integration.
    Downloads: 0 This Week
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  • 25
    pyLastFM graph is commandline tool for creating a nice looking graph time graph from Last.fm profile data. It uses the audioscrobbler.net XML interface and can create very high resolution output images.
    Downloads: 0 This Week
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