Showing 117 open source projects for "java modelling tools"

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  • 1
    NOVA

    NOVA

    Analysis and visualization of complexome profiling data.

    NOVA is a program designed to analysis complexome profiling data (Heide et al., 2012). A graphical user interface (GUI) provides various visualization tools, such as heat maps and 2D plots. Several hierarchical clustering algorithms (e.g., single linkage, average linkage, Wards linkage), different distance measures (e.g., Euclidean distance, Manhattan distance, Pearson distance), and various normalization techniques are implemented. Many additional functions like zooming, searching for...
    Downloads: 11 This Week
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  • 2
    Mass-Up

    Mass-Up

    MALDI-TOF data analysis tool

    Mass-Up is an Open-Source mass spectrometry utility for proteomics designed to support the preprocessing and analysis of MALDI-TOF mass spectrometry data. Mass-Up includes several tools and operations to load, preprocess and analyze MALDI-TOF data.
    Downloads: 1 This Week
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  • 3
    This is going to be a Java Swing Application that will be used as a quick reference for Java API names. It will feature incremental search and filtering so that searching efficiency is improved. It will be very simple and a good way to statistically analyze java api's.
    Downloads: 0 This Week
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  • 4
    Olex2 is visualisation software for small-molecule crystallography developed at Durham University/EPSRC. It provides comprehensive tools for crystallographic model manipulation for the end user and an extensible development framework for programmers. The project has been supported by Olexsys Ltd since 2010.
    Downloads: 0 This Week
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  • 5

    X10

    Performance and Productivity at Scale

    X10 is a class-based, strongly-typed, garbage-collected, object-oriented language. To support concurrency and distribution, X10 uses the Asynchronous Partitioned Global Address Space programming model (APGAS). This model introduces two key concepts -- places and asynchronous tasks -- and a few mechanisms for coordination. With these, APGAS can express both regular and irregular parallelism, message-passing-style and active-message-style computations, fork-join and bulk-synchronous...
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    Downloads: 21 This Week
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  • 6
    Alfresco Audit Analysis and Reporting
    With Alfresco Audit Analysis and Reporting (A.A.A.R.) is provided a solution to extract, store and query audit data together with the document/folder informations at a very detailed level, with the goal to be useful to the end-user in a very easy way. To reach that goal, to make the data more friendly for the end-user, the data are published in reports in well-known formats (pdf, Microsoft Excel, csv, etc.) and stored directly in Alfresco as static documents organized in folders, versioned,...
    Downloads: 4 This Week
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  • 7
    Bias :: Versatile Information Manager
    Bias is a cross-platform versatile information management application / Organizer
    Downloads: 0 This Week
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  • 8

    Adele

    Adhoc Data Exploration - Live & Easy

    Adele was developed to simplify the daily work with data. Use it as a swiss knife to fill the gap between your work with spreadsheet application like MS Excel and enterprise servers like SAP ERP. Specialized tools like Rapid Miner, KNIME or similiary stuff should not be replaced. But Adele is designed for business people working with spreadsheet applications to analyse their data. There are many technical concepts in an easier way included. For example realtime OLAP, transformations,...
    Downloads: 1 This Week
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  • 9

    FiMaLib

    a financial math library and financial market data database

    This project should combine a financial mathematics library with an underlying financial market database (and a set of other tools), which could be used by financial institutions for their financial market data needs as well as by students for research works.
    Downloads: 0 This Week
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  • 10
    Marid

    Marid

    Free data acquisition and data visualization cross-platform software

    Marid is a cross-platform data acquisition and visualization software intended to build complex and hierarchical data acquisition systems. The base concepts of its architecture include: * Graphical deploy configuration builders * Powerful Groovy scripting language * Embedded database ( H2 , HSQLDB) to store data * Cross-platform design (write once, run anywhere) * Embedded GUI-configurable binary/ascii device protocol parser/generator * Deploy manager to deploy firmwares to remote...
    Downloads: 0 This Week
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  • 11
    Open Cezeri Library

    Open Cezeri Library

    Effective Linear Algebra and Computer Vision Library with JAVA

    OCL stands for Open Cezeri Library (yet another linear algebra and matrix library). This library provides rapid coding as matlab ease of use. To learn for library please try to use test examples at OpenCezeriLibrary\test\test. It is originally developed at el-cezeri laboratory of Siirt University, in order to establish generic framework of reusable components and software tools for machine vision, machine learning, AI and robotic applications. Currently, it holds following main concepts 1-...
    Downloads: 0 This Week
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  • 12
    WOLFGANG

    WOLFGANG

    Editor for Petri nets

    Wolfgang is a lightweight tool that allows users to easily create and edit Petri nets and check them against general and workflow specific net properties. Specifically, Wolfgang supports full PNML conform editing functionality of Place-Transition Nets (P/T-Nets) and Colored Petri Nets (CPN) as they are defined in the SEPIA package. Its simple and easy to use interface allows to quickly create Petri nets from scratch, edit them graphically in many ways, store and even export them as PDFs. Use...
    Downloads: 0 This Week
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  • 13
    JBerd

    JBerd

    Java tools for decoding and manipulating BER encoded ASN.1 Files

    A simple Java ASN BER decoder and profiler A tool for easy manipulation of BER encoded files. An "awk" for ASN.1 BER (for Unix people) or maybe a "notepad" for ASN.1 BER (for Windows people). Jberd (Java BER decoder) is a lightweight BER decoder and associated tools for interpreting and processing BER encoded ASN.1 files. The following facilities are provided: • JBerd Profiler.
    Downloads: 0 This Week
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  • 14
    Toolboxes for SPM (http://www.fil.ion.ucl.ac.uk/spm/) developed at Freiburg Brain Imaging (http://fbi.uniklinik-freiburg.de/)
    Downloads: 3 This Week
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  • 15

    Chordalysis

    Log-linear analysis (data modelling) for high-dimensional data

    ...Associated papers at ICDM 2013, ICDM 2014 and SDM 2015 can be found at http://www.francois-petitjean.com/Research/ YourKit is supporting Chordalysis open source project with its full-featured Java Profiler. YourKit is the creator of innovative and intelligent tools for profiling Java and .NET applications. http://www.yourkit.com
    Downloads: 0 This Week
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  • 16

    SyntheticWSI

    Tools to generate and visualize artificial whole slide images

    Java 8+ required. Collection of tools to help generate artificial Whole Slide Images (WSIs). A WSI is stored as a ZIP archive of JPG tiles, and this software contains a tool to visualize this format. SVS files can be used directly for texture extraction (thanks to the included Bio-Formats library). Main source files in package fr.unistra.wsi.synthetic.
    Downloads: 0 This Week
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  • 17
    Civi Data Integration

    Civi Data Integration

    This is a Pentaho Data Integration plugin for CiviCRM.

    This is a Pentaho Data Integration plugin for CiviCRM. It allows you to take advantage of the power of Pentaho Data Integration tools and use it with your CiviCRM instance.
    Downloads: 2 This Week
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  • 18
    CMIS Input plugin for Pentaho

    CMIS Input plugin for Pentaho

    Allows querying Content Management Systems that use the CMIS.

    Imagine being able to extract from your Enterprise Content Management System, all the metadata of your documents using simple queries with a query language very close to the traditional SQL. Imagine using the information extracted for statistical purposes, for creating reports and, more generally, to analyse your document archives in a way unthinkable until now with the current tools available. All this is possible within the Pentaho Suite, the Open Source Business Intelligence platform,...
    Downloads: 0 This Week
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  • 19
    Cascalog

    Cascalog

    Data processing on Hadoop without the hassle

    Cascalog is a powerful Clojure (and Java) data processing and querying library built atop Hadoop (via Cascading), providing a high-level, Datalog-inspired abstraction for both big data processing and local computation. Cascalog is hosted at Clojars, and some of its dependencies are hosted at Conjars. Both Clo/Con-jars are maven repos that's easy to use with maven or leiningen. The Cascalog website contains more information and links to Various articles and tutorials. The best way to get...
    Downloads: 0 This Week
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  • 20
    ** Deprecated ** Important! All of the software on this web site has been deprecated, and has not been maintained since 2014. All of this software is now being maintained on Github - and can be obtained from https://github.com/jpaulm . Changes and enhancements are still ongoing, and while older software should still work, newer features described in the literature will not be available in SourceForge. The old license was the Artistic license - the software is now in process of...
    Downloads: 3 This Week
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  • 21
    KeplerDB

    KeplerDB

    Timeseries databases management system

    KeplerDB is a temporal database to store time/value entries where the type of value could be integer, float/double, boolean and string. KeplerDB is dedicated to be scalable and to create clusters of server allowing the user to analyse and store massing amount of data to monitor systems like computers, clusters, building and captors or financial systems like markets and accounts. The user can use KeplerDB to make data analysis on enormous amount of data (statistics and modelling).
    Downloads: 0 This Week
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  • 22
    Graphical Grammar Studio

    Graphical Grammar Studio

    An user friendly grammar tool for natural language processing tasks

    Full documentation with tutorials is included in the download package. Graphical Grammar Studio is a tool for applying grammars which behave as words acceptors/consumers and annotators. GGS grammars can be used to find and annotate sequences of words which respect certain conditions, in a given input. Its purpose is for creating NLP tools like phrase chunkers, named entity finders, pronoun co-reference solvers etc. A grammar is represented by a state machine which can be visualized, edited...
    Downloads: 0 This Week
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  • 23

    Ondex Web

    Web-based visualisation of networks using Java

    Ondex Web is a new web-based implementation of the network visualization and exploration tools from the Ondex data integration platform. New features such as context-sensitive menus and annotation tools provide users with intuitive ways to explore and manipulate the appearance of heterogeneous biological networks. Ondex Web is open source, written in Java and can be easily embedded into Web sites as an applet. Ondex Web supports loading data from a variety of network formats, such as XGMML, NWB, Pajek and OXL
    Downloads: 0 This Week
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  • 24

    Gurmi - Real time data aggregation

    Real time data aggregation, analysis GUI Tool

    Gurmi project is an aggregate of data analysis tools. Will collect and analyze data in real-time output from the various types of equipment that shows the various forms of visulization. Gurmi project goal of the data collection, analysis, output is easy to use.
    Downloads: 0 This Week
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  • 25
    Portable Linux

    Portable Linux

    Portable Ubuntu Linux for Scientific Computing

    Released August 22, 2013 Lubuntu Blends: Biochemistry 13.04 (Raring) v5.44 Linux Kernel Image 3.8.0-29 Lubuntu Blends are pre-installed Wubi disk image remixes of Ubuntu and Debian Science meta packages, A custom boot loader allows installations to be copied and automatically booted from most external or USB flash drives. Once up and running, use earlier Lubuntu Remix README instructions here until documentation is updated....
    Downloads: 8 This Week
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