Search Results for "general morphological analysis"
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Showing 85 open source projects for "general morphological analysis"
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SageMaker Spark Container
Docker image used to run data processing workloads
Apache Spark™ is a unified analytics engine for large-scale data processing. It provides high-level APIs in Scala, Java, Python, and R, and an optimized engine that supports general computation graphs for data analysis. It also supports a rich set of higher-level tools including Spark SQL for SQL and DataFrames, MLlib for machine learning, GraphX for graph processing, and Structured Streaming for stream processing. The SageMaker Spark Container is a Docker image used to run batch data processing workloads on Amazon SageMaker using the Apache Spark framework. ... -
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HEALPix
Data Analysis, Simulations and Visualization on the Sphere
Software for pixelization, hierarchical indexation, synthesis, analysis, and visualization of data on the sphere. Please acknowledge HEALPix by quoting the web page http://healpix.sourceforge.net (or https://healpix.sourceforge.io) and publication: K.M. Gorski et al., 2005, Ap.J., 622, p.759 Full software documentation available at https://healpix.sourceforge.io/documentation.php Wiki Pages: https://sourceforge.net/p/healpix/wiki/Home Exchanging Data with HEALPix (in FITS files):... -
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GMAT
General Mission Analysis Tool
The General Mission Analysis Tool (GMAT) is an open-source tool for space mission design and navigation. GMAT is developed by a team of NASA, private industry, and public and private contributors. The GMAT development team is pleased to announce the release of GMAT version R2026a. For a complete list of new features, compatibility changes, and bug fixes, see the R2026a Release Notes in the Users Guide. -
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Uranie
Uranie is CEA's uncertainty analysis platform, based on ROOT
Uranie is a sensitivity and uncertainty analysis plateform based on the ROOT framework (http://root.cern.ch) . It is developed at CEA, the French Atomic Energy Commission (http://www.cea.fr). It provides various tools for: - data analysis - sampling - statistical modeling - optimisation - sensitivity analysis - uncertainty analysis - running code on high performance computers - etc. Thanks to ROOT, it is easily scriptable in CINT (c++ like syntax) and Python. Is is... -
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relax
Molecular dynamics by NMR data analysis
The software package 'relax' is designed for the study of molecular dynamics through the analysis of experimental NMR data. Organic molecules, proteins, RNA, DNA, sugars, and other biomolecules are all supported. It supports exponential curve fitting for the calculation of the R1 and R2 relaxation rates, calculation of the NOE, reduced spectral density mapping, the Lipari and Szabo model-free analysis, study of domain motions via the N-state model and frame order dynamics theories using... -
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MCPower
MCPower — simple Monte Carlo power analysis for complex models
MCPower-GUI is a desktop application that provides a graphical interface for the MCPower Monte Carlo power analysis library. It guides users through the full workflow across three tabs: Model setup (formula input with live parsing, CSV data upload with auto-detected variable types, effect size sliders, and correlation editing), Analysis configuration (find power for a given sample size or find the minimum sample size for a target power, with multiple testing correction and scenario... -
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A python-based system to diagnosis and make weather maps (wxmap) of numerical weather prediction models using the Grid Analysis and Display System (GrADS) from opengrads.org
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QUAST
Quality Assessment Tool for Genome Assemblies
QUAST performs fast and convenient quality evaluation and comparison of genome assemblies. It is maintained by the Gurevich lab at HIPS (https://helmholtz-hips.de/en/hmsb). For the most up-to-date description, please visit http://quast.sf.net. Below are just some highlights. QUAST computes several well-known metrics, including contig accuracy, the number of genes discovered, N50, and others, as well as introducing new ones, like NA50 (see details in the paper and manual). A... -
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xrayutilities
a package with useful scripts for X-ray diffraction physicists
xrayutilities is a python package used to analyze x-ray diffraction data. It can support with performing diffraction experiments and used for common steps in the data analysis. It can read experimental data from several data formats (spec, edf, xrdml, ...); convert them to reciprocal space for arbitrary goniometer geometries and different detector systems (point, linear as well as area detectors); for further processing the data can be gridded (transformed to a regular grid). More... -
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Autoplot
Autoplot is an interactive browser for data on the web
Autoplot is an interactive browser for data on the web. Give Autoplot a URL or local file name and it creates a sensible plot of the data. Autoplot allows you to interactively browse data stored in ascii, .cdf, netcdf, and many other formats. Autoplot's source has been moved to GitHub. Thanks to SourceForge for many years of hosting! -
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Ubix Linux
The Pocket Datalab
Ubix stands for Universal Business Intelligence Computing System. Ubix Linux is an open-source, Debian-based Linux distribution geared towards data acquisition, transformation, analysis and presentation. Ubix Linux purpose is to offer a tiny but versatile datalab. Ubix Linux is easily accessible, resource-efficient and completely portable on a simple USB key. Ubix Linux is a perfect toolset for learning data analysis and artificial intelligence basics on small to medium... -
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GXSM
Scanning Probe Microscopy Controller and Data Visualization Software
GXSM -- Gnome X Scanning Microscopy: A multi-channel image and vector-probe data acquisition and visualization system designed for SPM techniques (STM,AFM..), but also SPA-LEED/LEED/LEEM data analysis. A plug-in interface allows any user add-on data-processing and special hardware and instrument support. Latest: NC-AFM and related explorative methods as SQDM can be configured. High-Speed external PAC-PLL hardware option with digital DSP link. Based on several hardware options it supports... -
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hui
hewies user interface - 3D scientific visualisation tool
Python project with goal to provide FOSS library to extract, analyse and visualise data in a 3D fashion. The instance will connect to a data source, ods sheet, csv, sql DB, pyodbc the instance will analyse and/or transform the data to be presented to the visualisation functionality the instance will visualise the data in a 3D fashion, likely using third party FOSS -
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SciDAVis is a user-friendly data analysis and visualization program primarily aimed at high-quality plotting of scientific data. It strives to combine an intuitive, easy-to-use graphical user interface with powerful features such as Python scriptability.
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pydatascope
Software oscilloscope using Python and tkinter
Software oscilloscope using Python and tkinter. Supports multiple sources: socket, file, audio, USB. Displays data by samples, time or frequency. Scales the input automatically or manually. -
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OpenFrames
Real-time interactive 3D graphics API for scientific simulations
...A simulation developer can use OpenFrames to specify what they want to visualize, without having to know any details of computer graphics programming. OpenFrames is currently used by three NASA programs: Copernicus (NASA JSC), the General Mission Analysis Tool (GMAT, NASA GSFC), and a Virtual Reality exploration tool (NASA GSFC). -
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Crystalsim - XRD hkl simulation
X-ray diffraction (XRD) analysis for hkl simulation of any crystal.
Crystalsim is a simple freeware program with a neat graphical user interface for X-ray diffraction (XRD) data analysis . It can simulates all possible {hkl} planes data for the selected crystal. Crystallographic Information File (.cif) can also be used. Analyze both powder diffraction and single crystal data . Indexed at International Union of Crystallography (IUCR). Crystalline lattice parameters such as ‘a’, ‘b’, ‘c’ as well as interfacial angles such as alpha, beta,... -
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abu
Abu quantitative trading system (stocks, options, futures, bitcoin)
Abu Quantitative Integrated AI Big Data System, K-Line Pattern System, Classic Indicator System, Trend Analysis System, Time Series Dimension System, Statistical Probability System, and Traditional Moving Average System conduct in-depth quantitative analysis of investment varieties, completely crossing the user's complex code quantification stage, more suitable for ordinary people to use, towards the era of vectorization 2.0. The above system combines hundreds of seed quantitative models,... -
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GEOMS2
Geostatistics and geosciences modeling software
GEOMS2 is a geostatistics and geosciences modeling software. Provides interface for grid (mesh), point, surface and data (non-spatial) objects. It has a 3D viewer and 2D plots using the well known Python engines Mayavi and Matplotlib. It has several functions to manipulate your data as well as provide univariate and multivariate analysis. NOTE: The software is still an early beta. Please tell us if you found a bug. Download datasets for students of Geostatistics 2017 (Petroleum... -
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VividSTORM
Correlated confocal and SMLM data visualization and analysis
VividSTORM is a free and open-source standalone software with graphical user interface, for the correlated visualization and analysis of superresolution single molecule localization microscopy (SMLM) molecule lists and conventional pixel intensity-based images. The localization points (LPs) within this ROI can be analyzed using the selected built-in functions. NOTE: If you encounter issues not addressed by the user guide, please contact by message on this site or via e-mail for... -
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fooltrader
Quant framework for stock
Build a standard data schema, and then implement various connectors to import systems you are familiar with for analysis. fooltrader is a quantitative analysis trading system designed using big data technology, including data capture, cleaning, structuring, calculation, display, backtesting and trading. Its goal is to provide a unified framework for the whole market (stock, futures, bonds, foreign exchange, digital currency, macroeconomics, etc.) for research, backtesting, forecasting, and... -
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GDL - GNU Data Language, a free IDL (Interactive Data Language, see http://ittvis.com/idl/) compatible incremental compiler.
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ELINT Alchemist
Plot, analyse and measure ELINT Time-Based data.
This program will open an ELINT Time-Based Data (TBD) file and plot it for purposes of measurement and analysis. Test files included. New ver 0.4 added 2018-01-01. -
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Collaborative Computing Project for NMR
Collaborative Computing Project for NMR (CCPN)
The Collaborative Computational Project for NMR (CCPN) provides tools and knowledge to maximise the impact of the biological NMR studies. The CCPN software facilitates data analysis and software integration. The project actively promotes the exchange of knowledge and provides training and best practices for the NMR community. CCPN also has a leading role in the development of a NMR data-sharing standard and coordination of NMR instrumentation proposals for RCUK and BIS. The 28 partners of... -
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DSTK - DataScience ToolKit
DSTK - DataScience ToolKit for All of Us
DSTK - DataScience ToolKit is an opensource free software for statistical analysis, data visualization, text analysis, and predictive analytics. Newer version and smaller file size can be found at: https://sourceforge.net/projects/dstk3/ It is designed to be straight forward and easy to use, and familar to SPSS user. While JASP offers more statistical features, DSTK tends to be a broad solution workbench, including text analysis and predictive analytics features. Of course you may specify...