Search Results for "multi-system" - Page 3
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Showing 145 open source projects for "multi-system"
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Waterloo
Java-based scientific graphics
Java-based scientific graphics with support for Java, Groovy, MATLAB, Python, the R statistical environment, Scala and SciLab. -
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Py3DN
Morphometric analysis and visualization of the 3D structure of neurons
Py3DN, is an open-source solution providing innovative tools to analyze 3D data collected with the widely used commercial system Neurolucida (MBF). It allows the construction of mathematical representations of neuronal topology, visualization and a variety of morphometric analysis on the neuronal structures. Above all, it provides a flexible environment where new types of analyses can be easily set up allowing total freedom to test new hypotheses. The application was developed in Python and uses Blender (an open source program) to produce detailed 3D representations of raw and processed data. ... -
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ExAM-Exome_Analysis_And_Mining
A whole exome sequencing analysis package and its graphical interface
During the past few years, whole exome sequencing has imposed itself for genetic research, largely due to its use for detection of causative mutations responsible for Mendelian disorders. As a consequence of their power and of the rapidly decreasing cost of these technologies, massive amount of exome sequencing data are generated and becoming available to a broadening community of scientists. However, these data remain difficult to analyze and interpret by the general scientific community,... -
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TinkerCell is a software for synthetic biology. The visual interface allows users to design networks using various biological "parts". Models can include modules and multiple cells. Users can program new functions using C or Python. www.tinkercell.
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UV-CDAT
Ultrascale Visualization Climate Data Analysis Tools
Ultrascale Visualization Climate Data Analysis Tools (UV-CDAT), is a powerful and complete front-end to a rich set of visual-data exploration and analysis capabilities well suited for climate-data analysis problems. -
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BioImageXD - free open source software for analysis, processing and 3D rendering of multi dimensional, multi data channel, time series image data from microscopy and other sources.
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Python Open Source Echosounder Toolkit
real-time visualization of network data broadcasts from echosounders
During acoustic surveys of marine ecosystems, fisheries scientists need to quickly interpret large amounts of echosounder data and decide whether and where to sample for targeted organisms. The Python Open Source Echosounder Toolkit (pyOSET) was designed to facilitate this process by providing near real-time visualization of network data broadcasts from multiple echosounder systems, and to serve as a framework for implementation of algorithms to detect, locate, and identify fish or the... -
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MSCViewer
A tool for visualization and analysis of logs as sequence diagrams
MSCViewer is a tool intended for debugging of control flows in concurrent, distributed systems. The tool loads logs generated by various entities in the system and visualize a sequence diagram chart for events and interactions. The diagram is fully interactive: entity can be added/removed from the diagram and shuffled; events can be filtered, searched, highlighted and annotated with comments. MSCViewer features integration with a Python interpreter which allows writing Python scripts interacting with the model. ... -
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MicroView is a 2D/3D image viewer and analysis tool. It is written in Python and uses VTK for all of its graphical capabilities.
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Data logger, manipulator and visualizer. Receives data in CSV format from stdio.
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Python language bindings for the GtkExtra widget set. GtkExtra is a useful set of widgets for the GIMP Toolkit, aka GTK+. It provides a spreadsheet-like matrix widget and widgets for 2-D and 3-D graphing.
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COV2HTML
A visualization and analysis tool of Bacterial NGS data for Biologists
COV2HTML provides an easy and 'in home' web interface for biologists that allows coverage visualization of the NGS alignment needed for the analysis. It combines two essential processes: (i) MAP2COV, a tool that converts the huge NGS mapping or coverage files into light specific coverage files which contains genetic elements informations. (ii) COV2HTML, a visualization interface allowing a real-time analysis of data with selected criteria. Thus this interface offers a visualization of NGS... -
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Create, check, annotate, merge, diff, split SBML (System Biology Markup Lanugage) documents. The latest version of semanticSBML is webbased with a RESTful interface.
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TabZilla
Ad-hoc data replication for Oracle database.
#FreeUkraine #SaveUkraine #StopRussia #StopPutin #CrimeaIsUkraine #UnitedForUkraine #RussiaInvadedUkraine UI written using wxPython. Allows you, to copy tables between Oracle databases using drag-n-drop interface. AKA filezilla, but for tables, not files. -
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WebChemViewer
A simple program for sharing molecular structures with associated data
Sharing lists of molecular structures with associated chemical properties is a common task in computer-aided drug design and medicinal chemistry. WebChem Viewer is a simple, free, open-source program that generates HTML-formatted output that can be viewed in any modern web browser, on any operating system (including mobile), without requiring the installation of additional software. The output can also be easily incorporated into existing web pages. WebChem Viewer is released under the FreeBSD license. It was created by Jacob Durrant, a post-doc in the lab of Rommie E. Amaro. -
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Flightdeck-UI is a project that utilizes the ideas from the design of aircraft controls and instruments for creating computer user interfaces, such as for monitoring.
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pyMantis is a data-management system for (systems) biology build on the web2py framework. It features: tree based file explorer, relational db table wizzard with automated creation of user interfaces, internal and external access management, wiki, ..
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A command-line interface for the OpenGroupware Coils collaboration platform and OIE workflow solution. Using snurtle you can manage and examine the content of your Coils server as well as manage workflows all from a convenient command line interface
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Portable Linux
Portable Ubuntu Linux for Scientific Computing
Released August 22, 2013 Lubuntu Blends: Biochemistry 13.04 (Raring) v5.44 Linux Kernel Image 3.8.0-29 Lubuntu Blends are pre-installed Wubi disk image remixes of Ubuntu and Debian Science meta packages, A custom boot loader allows installations to be copied and automatically booted from most external or USB flash drives. Once up and running, use earlier Lubuntu Remix README instructions here until documentation is updated.... -
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Pumilio is a web-based sound analysis and archive system for almost any kind of sound file with tools to see the spectrogram of the sound, select regions for further analysis and insertion in a database, filtering, and many other manipulations.
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PBS Cluster Viz is a project to display information useful to admins and users about a computing cluster managed by a PBS-compatible resource manager. Information includes load and job distribution. Interactive as well as static output is available.
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Our goal is to find out useful and funny ways for expanding the possibilities of many FOSS by integrating them with other FOSS and proprietary systems. You'll find here many open source plugins and extensions useful to put those FOSS hermits together.
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CollectD-CSV Plotter
Web interface for visualizing CSV data from CollectD monitoring system
CollectD-CSV Plotter is a web interface for fetching and visualizing data that is saved in CollectD CSV format. An HTML form is used for defining the time interval and choosing the wanted measurements. The plotter is actually a front-end for collectd-csv module (http://pypi.python.org/pypi/collectd-csv/), which it uses for fetching the data. Technologies CollectD-CSV Plotter uses include CGI/Python, HTML5/JavaScript, jQuery, jQuery-UI and Gnuplot. -
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SZARP is a full-featured, open source (GPL) SCADA system for Linux. Client programs are available for Linux and Windows.
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A High-Order Multi-Variate Approximation Scheme for Arbitrary Data Sets, C implementation of the method described in http://web.mit.edu/qiqi/www/paper/interpolation.pdf, with Python and Fortran interfaces.
