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Free Organic Chemistry Analysis and Visualisation Tool; Chemical formula editor, calculation of threedimensional molecular structures, high-quality realtime rendering, ...
"MITO - Medical Imaging TOolkit" is an open-source, Windows-based software architecture for advanced Medical Imaging. Main characteristics are: DICOM compliant, 2D/3D/S3D visualization, image segmentation and fusion, ROI, advanced 3D user interface
Implementation of the Weight Spherical Centroidal Voronoi Tessellation described in http://arxiv.org/abs/0912.3974
It uses this implementation of convex hull: http://www.cs.ubc.ca/~lloyd/java/quickhull3d.html
On The Mark is a video and image scoring system that allows one to mark any number of events and durations through a simple, easy-to-use graphical interface.
JTreeMap is a Swing Component which represents a tree structure with rectangles (a TreeMap. See http://www.cs.umd.edu/hcil/treemap/). KTreeMap is the SWT component for treemapping (see http://en.wikipedia.org/wiki/Treemapping). It is an Eclipse plugin.
RayLab is a simple, portable ray tracer for producing 3D images. It uses a custom text-based scene description language, and supports several mathematical shapes, as well as CSG operations (constructive solid geometry).
Solvere4D is a powerful, open-source, freely available post-processor that makes it easy for anyone to generate 3D animations of 3D rigid body kinematics and kinetics, with many visualization options.
Kabeja is a java library for parsing DXF and converting to SVG (dxf2svg). The library supports the SAX-api and can integrated into other applications (Cocoon,Batik). Tools for converting svg to jpeg, tiff, png and pdf are included .
Transform your applications and workflows into powerful agentic systems at global scale.
Gemini Enterprise Agent Platform lets you rapidly build, scale, govern and optimize production-ready agents grounded in your organization's data. The platform enables developers to build custom or pre-built agents for virtually any use case. New customers get $300 in free credits.
A plugin for the VANTED system, called Glyph-based Link Exploration of Pathways (GLIEP). It helps to guide the navigation and exploration process of interconnected pathway visualization as well as insight into the overall interconnectivity.
JEuclid is a complete MathML rendering solution, consisting of: a MathViewer application, command line converters from MathML to other formats, an ant task for autmated conversion, display components for AWT and Swing and a component for Apache Cocoon
Jep is a Java package for parsing and evaluating mathematical expressions. It currently supports user defined variables, constants, and functions. The open-source Jep project was halted in favor of commercial development of version 3.0 upwards.
QtImageCut - can cut and save selected image region with just a few easy steps. Can do some work atomatically.
QtRectangle - get dimentions an geometry of selected areas with ease.
Other ideas are velcome.
PAICE is a rapid bioinformatics pathway visualization tool for KEGG-compatible accessions derived from Illumina Solexa next-gen and Affymetrix datasets. It colors KEGG pathways while appreciating detection-calls and duplicate gene copies.
Intrepid Bioinformatic's Integrative Genomics Viewer (IGV) modifications for viewing NGS files on IGV with data located on remote servers, accessed by web services.
UDAV is program for data arrays visualization based on MathGL library. It support wide spectrum of graphics, simple script language and visual data handling and editing.
Gri is a language for scientific graphics programming. It is
script-based, not GUI-based. Some users view it as a sort of LaTeX
for scientific graphics. Users who climb a slight learning curve are
rewarded with considerable aesthetic power.
Worldlines visualizes special relativity, as particles near lightspeed trace paths in a 3D slice of 4D Minkowski spacetime. Scenes illustrate time dilation, the twin paradox, length contraction, and Bell's spaceship paradox.
Flow Investigation using N-Dimensions (FIND) is a program designed for analysis and visualization of Flow Cytometry data. FIND focuses specifically on automated population discovery (clustering) methods. The project targets both users and developers.