Search Results for "matrix"
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Showing 48 open source projects for "matrix"
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ExponentialUtilities.jl
Fast and differentiable implementations of matrix exponentials
ExponentialUtilities is a package of utility functions for matrix functions of exponential type, including functionality for the matrix exponential and phi-functions. These methods are more numerically stable, generic (thus support a wider range of number types), and faster than the matrix exponentiation tools in Julia's Base. The tools are used by the exponential integrators in OrdinaryDiffEq. -
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Rotations.jl
Julia implementations for different rotation parameterizations
...This package implements various 3D rotation parameterizations and defines conversions between them. At their heart, each rotation parameterization is a 3×3 unitary (orthogonal) matrix (based on the StaticArrays.jl package), and acts to rotate a 3-vector about the origin through matrix-vector multiplication. While the RotMatrix type is a dense representation of a 3×3 matrix, we also have sparse (or computed, rather) representations such as quaternions, angle-axis parameterizations, and Euler angles. All rotation types support one(R) to construct the identity rotation for the desired parameterization. -
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BlockArrays.jl
BlockArrays for Julia
...Secondly, it also implements two different types of block arrays that follow the AbstractBlockArray interface. The type BlockArray stores each block contiguously while the type PseudoBlockArray stores the full matrix contiguously. This means that BlockArray supports fast noncopying extraction and insertion of blocks while PseudoBlockArray supports fast access to the full matrix to use in for example a linear solver. -
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HCubature.jl
Pure-Julia multidimensional h-adaptive integration
...Because hcubature is written purely in Julia, the integrand f(x) can return any vector-like object (technically, any type supporting +, -, * real, and norm: a Banach space). You can integrate real, complex, and matrix-valued integrands, for example. Note that HCubature assumes that your function f(x) can be computed at arbitrary points in the integration domain. (This is the ideal way to do numerical integration.) If you instead have f(x) precomputed at a fixed set of points, such as a Cartesian grid, you will need to use some other method (e.g. ... -
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SymEngine.jl
Julia wrappers of SymEngine
Julia Wrappers for SymEngine, a fast symbolic manipulation library, written in C++. -
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AbstractAlgebra.jl
Generic abstract algebra functionality in pure Julia
AbstractAlgebra is a pure Julia package for computational abstract algebra. It grew out of the Nemo project and provides all of the abstract types and generic implementations that Nemo relies on. It was originally developed by William Hart, Tommy Hofmann, Fredrik Johansson and Claus Fieker with contributions from others. Current maintainers are Claus Fieker, Tommy Hofmann and Max Horn. -
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Nemo.jl
Julia bindings for various mathematical libraries (including flint2)
Nemo is a computer algebra package for the Julia programming language. It aims to cover commutative algebra, number theory and group theory. Julia bindings for various mathematical libraries (including flint2) -
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hctsa
Highly comparative time-series analysis
...It extracts thousands of time-series features from a collection of univariate time series and includes a range of tools for visualizing and analyzing the resulting time-series feature matrix. -
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UMAP.jl
Uniform Manifold Approximation and Projection (UMAP) implementation
A pure Julia implementation of the Uniform Manifold Approximation and Projection dimension reduction algorithm. The umap function takes two arguments, X (a column-major matrix of shape (n_features, n_samples)), n_components (the number of dimensions in the output embedding), and various keyword arguments. -
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EvoTrees.jl
Boosted trees in Julia
A Julia implementation of boosted trees with CPU and GPU support. Efficient histogram-based algorithms with support for multiple loss functions, including various regressions, multi-classification and Gaussian max likelihood. -
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Tullio.jl
Tullio is a very flexible einsum macro
Tullio is a very flexible einsum macro. It understands many array operations written in index notation -- not just matrix multiplication and permutations, but also convolutions, stencils, scatter/gather, and broadcasting. Used by itself the macro writes ordinary nested loops much like Einsum.@einsum. One difference is that it can parse more expressions, and infer ranges for their indices. Another is that it will use multi-threading (via Threads.@spawn) and recursive tiling, on large enough arrays. -
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Reduce.jl
Symbolic parser for Julia language term rewriting using REDUCE algebra
REDUCE is a portable general-purpose computer algebra system. It is a system for doing scalar, vector and matrix algebra by computer, which also supports arbitrary precision numerical approximation and interfaces to gnuplot to provide graphics. It can be used interactively for simple calculations (as illustrated in the screenshot below) but also provides a full programming language, with a syntax similar to other modern programming languages. -
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libCEED
CEED Library: Code for Efficient Extensible Discretizations
...While our focus is on high-order finite elements, the approach is mostly algebraic and thus applicable to other discretizations in factored form, as explained in the user manual and API implementation portion of the documentation. One of the challenges with high-order methods is that a global sparse matrix is no longer a good representation of a high-order linear operator, both with respect to the FLOPs needed for its evaluation, as well as the memory transfer needed for a matvec. Thus, high-order methods require a new "format" that still represents a linear (or more generally non-linear) operator, but not through a sparse matrix. -
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MyBox
Easy Tools of PDF, Image, File, Network, Data, and Medias
javafx-desktop-apps pdf image ocr icc barcode color-palette text bytes markdown html archive compress digest video audio editor converter media https://github.com/Mararsh/MyBox Self-contain packages need not java env nor installation. Jar packages need Java 16 or higher. -
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glvertex
Support for legacy OpenGL in core profiles
The glVertex library emulates the legacy OpenGL API, which has been deprecated in OpenGL core profiles. It is also a convenience wrapper around GLSL shaders, VBOs and FBOs. -
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Java 2D & 3D visual entity relationship design & modeling (ERD,SQL) for Oracle,MSSQL,Postgres,MySQL,...,Database change&dictionary management, Swing Data Binding, Apache FOP Renderer for dot matrix printers,Sparx Enterprise Architect Reports + more
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DeepH-pack
Deep neural networks for density functional theory Hamiltonian
DeepH-pack is the official implementation of the DeepH (Deep Hamiltonian) method described in the paper Deep-learning density functional theory Hamiltonian for efficient ab initio electronic-structure calculation and in the Research Briefing. DeepH-pack supports DFT results made by ABACUS, OpenMX, FHI-aims or SIESTA and will support HONPAS. -
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ProxSDP.jl
Semidefinite programming optimization solver
ProxSDP is an open-source semidefinite programming (SDP) solver based on the paper "Exploiting Low-Rank Structure in Semidefinite Programming by Approximate Operator Splitting". The main advantage of ProxSDP over other state-of-the-art solvers is the ability to exploit the low-rank structure inherent to several SDP problems. -
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missingno
Missing data visualization module for Python
...missingno provides a small toolset of flexible and easy-to-use missing data visualizations and utilities that allows you to get a quick visual summary of the completeness (or lack thereof) of your dataset. Just pip install missingno to get started. This quickstart uses a sample of the NYPD Motor Vehicle Collisions Dataset dataset. The msno.matrix nullity matrix is a data-dense display which lets you quickly visually pick out patterns in data completion. At a glance, date, time, the distribution of injuries, and the contribution factor of the first vehicle appear to be completely populated, while geographic information seems mostly complete, but spottier. The sparkline at right summarizes the general shape of the data completeness and points out the rows with the maximum and minimum nullity in the dataset. ... -
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DiffEqOperators.jl
Linear operators for discretizations of differential equations
...Care is taken to give efficiency by avoiding unnecessary allocations, using purpose-built stencil compilers, allowing GPUs and parallelism, etc. Any operator can be concretized as an Array, a BandedMatrix or a sparse matrix. -
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ManifoldLearning
Package for manifold learning and nonlinear dimensionality reduction
A Julia package for manifold learning and nonlinear dimensionality reduction. Most of the methods use k-nearest neighbors method for constructing local subspace representation. By default, neighbors are computed from a distance matrix of a dataset. This is not an efficient method, especially, for large datasets. -
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Nexplorer is a web-based phylogenetic browser, used to view and edit comparative data, and ideal for creating publication-quality views in which the tips of a tree are aligned with the rows of a character matrix (e.g., a sequence alignment).
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eMatrix
A C++ Matrix Library
eMatrix is a lightweight matrix library developed in C++. EMatrix is designed to help solve engineering problems requiring linear algebra. eMatrix is OS independent and is fairly portable. New features include inv(A) and det(A). -
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CNN Explainer
Learning Convolutional Neural Networks with Interactive Visualization
...Neural Networks in general are composed of a collection of neurons that are organized in layers, each with their own learnable weights and biases. Let’s break down a CNN into its basic building blocks. A tensor can be thought of as an n-dimensional matrix. In the CNN above, tensors will be 3-dimensional with the exception of the output layer. A neuron can be thought of as a function that takes in multiple inputs and yields a single output. The outputs of neurons are represented above as the red → blue activation maps. -
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Clustergrammer
An interactive heatmap visualization built using D3.js
Clustergrammer is a visualization library built using D3.js that enables intuitive interaction with high-dimensional data. Clustergrammer was built with biological data in mind. Clustergrammer is a web-based tool for visualizing high-dimensional data (e.g. a matrix) as an interactive and shareable hierarchically clustered heatmap. Clustergrammer's front end (Clustergrammer-JS) is built using D3.js and its back-end (Clustergrammer-PY) is built using Python. Clustergrammer produces highly interactive visualizations that enable intuitive exploration of high-dimensional data and has several biology-specific features (e.g. enrichment analysis, see Biology-Specific Features) to facilitate the exploration of gene-level biological data.
