Search Results for "java programs"
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Showing 23 open source projects for "java programs"
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JavaCall.jl
Call Java from Julia
Call Java programs from Julia. Julia 1.3.0 through Julia 1.6.2 are tested and guaranteed to work on Linux, macOS, and Windows via continuous integration. Julia 1.6.2 and newer should work on Linux and Windows. The JULIA_COPY_STACKS environment variable should be set to 1 on macOS and Linux, but not Windows. -
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Algorithm Visualizer
Interactive Online Platform that Visualizes Algorithms from Code
...The project is intentionally informal and educational: it’s meant for experimentation, learning language-interop, and having fun rather than production-grade automation. Many implementations exist across languages (shell, Ruby, Python, Node, PowerShell, Go, Java, and more) and contributors are encouraged to add further -
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Jmol
An interactive viewer for three-dimensional chemical structures.
Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other quantum chemistry programs. ... -
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GETL
ETL engine based on Groovy
...His name is an acronym for «Groovy ETL». GETL is a set of libraries of pre-built classes and objects that can be used to solve problems unpacking, transform and load data into programs written in Groovy, or Java, as well as from any software that supports the work with Java classes. GETL taken into account when developing ideas and following requirements: 1. The simpler the class hierarchy, the easier solution; 2. The data structures tend to change over time, or not be known in advance, working with them must be maintained; 3. ... -
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Aestel
Applications for data management
"Information is data in action", and, consequently, having good quality data is essential. The AESTEL package contains two highly configurable applications for data management: A data loader and a reporting application, i.e. DataLoader and AEREA, respectively. The data loader application applies user-defined instructions to validate, process and load data. The reporting application provides a query builder and spreadsheet template designer. Both applications work with any relational data... -
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Log4jScanner
A log4j vulnerability filesystem scanner and Go package
log4jscanner is a filesystem scanner and Go package that helps organizations quickly identify vulnerable Log4j components inside JARs and shaded dependencies. Instead of probing networks, it walks directories and archives, including nested JARs, to find version fingerprints and risky classes associated with the Log4Shell family of issues. The focus on static analysis makes it suitable for container images, build artifacts, and offline systems where active scanning isn’t feasible. Clear,... -
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ParTools
Support for manual parallelization of sequential C programs.
ParTools allows the interactive analysis of a C program execution profile and data dependencies to facilitate the discovery and selection of suitable parallelization candidates in a manual parallelization process. The flow does not assume any specific parallelization technique, thus it can be broadly applied. The original (serial) C source is automatically annotated to trace the execution profile and data dependencies at run-time. The annotated program is then executed using a... -
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Bamformatics
Toolkit and GUI for sequencing data analysis
The Bamformatics project aims to provide a coherent and consistent approach to analysis of high-throughput sequencing data. Its toolkit includes, among others, programs to identify variants and to compute various types genomic tracks. It also provides a graphical user interface to facilitate general bioinformatic workflows. The project wiki contains further details. -
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JBerd
Java tools for decoding and manipulating BER encoded ASN.1 Files
A simple Java ASN BER decoder and profiler A tool for easy manipulation of BER encoded files. An "awk" for ASN.1 BER (for Unix people) or maybe a "notepad" for ASN.1 BER (for Windows people). Jberd (Java BER decoder) is a lightweight BER decoder and associated tools for interpreting and processing BER encoded ASN.1 files. The following facilities are provided: • JBerd Profiler. A tool for profiling the contents of BER encoded files • JBerd Flattener. A tool for converting BER... -
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scipion-xmipp
Image processing framework to integrate EM software packages.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated... -
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The MWDB2 project is a combination of cartographic data, associated programs and Java code. Data includes coastlines, islands, lakes rivers, country and state/province boundaries. Data & code can be used on both Intel and non-Intel based computers.
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The Java Astrodynamics Toolkit is a library of components to help users create their own application programs to solve problems in astrodynamics, mission design, spacecraft navigation, guidance and control using Java or Matlab.
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Decision Table Preprocessor
Ccide is a Decision Table preprocessor.
Ccide reads a source program, in one of several programming languages, expands all embedded decision tables, and generates the new, expanded source. Ccidew processes C language programs directly. The script, ccide, uses ccidew and m4, to process BASIC, JAVA, CC, C++, BASH, QB, VB, and EX(euphoria), source files containing embedded decision tables. Ccide checks all conditions once and only once, avoiding side effects. Ccide checks tables for conflicts and other errors. Input example: //DECISION_TABLE: // 1 3 2 2 | light == $$ /* 1=red, 2= yellow, 3=green. */ // N - - - | speed == STOPPED // - - Y - | speed == SLOW // - N - Y | speed == FAST // ______|___________________ // X - X - | Stop(); // - - - X | SlowDown(); // - X - - | SpeedUp(); //END_TABLE: -
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This project provides a java implementation of the Captcha project ( see http://www.captcha.net ). A CAPTCHA is a program that can generate and grade tests that: -Most humans can pass. -Current computer programs can't pass.
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JOELib/JOELib2 is a cheminformatics library which supports SMARTS substructure search, descriptor calculation, processing/filtering pipes, conversion of file formats, 100% pure Java, and interfaces to external programs (e.g. Ghemical) are available.
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SYSTEM FOR DESIGNING AND SIMULATE CONCURRENT AND DISTRIBUTED PROGRAMS IN CLUSTER ARCHITECTURE Provides graphical interface for configuring relationships between cooperating, abstract processes and simulate it in real cluster environment, using MPI.
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The JChemPaint Applet and Swing Application are Java programs for drawing 2D chemical structures like those found in most chemistry textbooks. It is based on the Chemistry Development Kit (cdk.sf.net). Downloads, tracker, and source code repository can be found on https://jchempaint.github.io
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openplot is a plotting library and support programs using OpenGL and C++ (possibly Java at a later stage). openplot is: * open source * OpenGL * open for business scientific plotting and graphics application
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The Generation5 Java Development Kit (JDK) enables users to create demonstration programs and applets for a wide variety of Artificial Intelligence and Artificial Life paradigms.
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Web interface to a prolog interpreter, where you can load prolog programs, do consults, and visualize the resolution tree in SVG.
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A Java program to parse chemical names using IUPAC nomenclature. The output can be either a visualisation of the molecule, or in a form for other programs to use (e.g. CML).
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JViz is a prototype 3d visualization application that was created to help beginning Java programmers understand the structure, design and coding habits of their Java programs, and which parts of their programs need the most improvement.
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iFlow is an open source visualization software that transforms programs into interactive control flow graphs. It can be used for educational or presentational purposes. APIs are provided for potential control analysis or even compiler optimizations.
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