Search Results for "graph" - Page 3
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Showing 172 open source projects for "graph"
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StellarGraph
Machine Learning on Graphs
StellarGraph is a Python library for machine learning on graphs and networks. The StellarGraph library offers state-of-the-art algorithms for graph machine learning, making it easy to discover patterns and answer questions about graph-structured data. It can solve many machine learning tasks. Graph-structured data represent entities as nodes (or vertices) and relationships between them as edges (or links), and can include data associated with either as attributes. For example, a graph can contain people as nodes and friendships between them as links, with data like a person’s age and the date a friendship was established. ... -
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Newsvendor Model Simulation Spreadsheet
Excel Spreadsheet Model for Single Period Inventory Problems
The spreadsheet (Excel) of a single-period inventory model with stochastic demand can be used as a simulation tool for engineering education or Decision Support System. Based on spreadsheet techniques and examples described in the following sources: Albright S. C., & Winston W. L. (2005). Spreadsheet modeling and applications: essentials of practical management science, South-Western Pub. Albright, S. C. W. C., Winston, W., & Zappe, C. (2010). Data analysis and decision making. Cengage... -
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graphdot
Visualize Go module dependencies in Graphviz DOT format
Visualize Go module dependencies in Graphviz DOT format. Run graphdot in the directory of any project using Go modules with a go.mod file to print out a dependency graph in Graphviz DOT format. The output can be piped directly into dot to generate a PNG image file. For large graphs with many nodes of dependencies, you may want to generate an SVG file to allow you to zoom in with high fidelity and save disk space instead. If you like a more UML'ish style, you can use the provided graph properties from uml.gprops. -
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Pigale is a graph editor and a C++ algorithm library essentially concerned with planar graphs. This software, particularly intended for graph theoretical research, includes new algorithms based on our recent theoretical researches.
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xeogl
A WebGL-based 3D engine for technical visualization
xeogl is an open source JavaScript library from xeolabs for 3D model visualization on WebGL. It gives you tools to create interactive 3D worlds in your browser. Load models from formats like glTF or OBJ, or generate them programmatically. Navigate them with the camera and script them with Javascript, to build compelling 3D presentations. Load multiple models. Isolate/move/emphasize objects. Camera navigation controls. Camera animations (flyto, follow, path etc). Emphasis effects (wireframe,... -
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Novembre
STM data analysis
A tool for visualisation and analysis of STM and STS results. Currently supports RHK, WinSPM, Nanonis and Createc file formats. Other formats can be added. Tools are made available by plugins and are currently focused on spectroscopy manipulation. -
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Cosmos DB Spark
Apache Spark Connector for Azure Cosmos DB
Azure Cosmos DB Spark is the official connector for Azure CosmosDB and Apache Spark. The connector allows you to easily read to and write from Azure Cosmos DB via Apache Spark DataFrames in Python and Scala. It also allows you to easily create a lambda architecture for batch-processing, stream-processing, and a serving layer while being globally replicated and minimizing the latency involved in working with big data. -
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Grinn
graph database and R package for omic data integration
http://kwanjeeraw.github.io/grinn/ -
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Flame Graphs
Stack trace visualizer
...They can be generated using my open source programs, which create interactive SVGs. See the Updates section for other implementations. Recently I've been helping with d3-flame-graph. The x-axis shows the stack profile population, sorted alphabetically (it is not the passage of time), and the y-axis shows stack depth, counting from zero at the bottom. Each rectangle represents a stack frame. The wider a frame is is, the more often it was present in the stacks. The top edge shows what is on-CPU, and beneath it is its ancestry. ... -
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A spring-based 3D graph layout tool written in Java. Rendering is performed in OpenGL via the JOGL library.
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vizceral
WebGL visualization for displaying animated traffic graphs
vizceral is a component for displaying traffic data on a webgl canvas. If a graph of nodes and edges with data about traffic volume is provided, it will render a traffic graph animating the connection volume between nodes. This component can take multiple traffic graphs and will generate a 'global' graph showing all incoming traffic into each of the 'regions', with support for cross-region traffic. There are three levels of information, global, regional, and service-level, with clicking or double-clicking on a node bringing you one level deeper. ... -
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React Trend
Simple, elegant spark lines
Unfortunately, none of this project's authors have the time/enthusiasm to maintain this project right now. We recommend forking this project, or reading its source to learn how it's built). Graphing tools are often complex, abstract, and heavy. They require domain-specific knowledge and significant time investment. While building rich data visualizations for an analytics app, is a necessary cost. But what if you just need a sparkline that shows a trend? These are very simple and elegant... -
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Hetionet
Hetionet: an integrative network of disease
...The JSON and Neo4j formats contain node and edge properties, which are absent in the TSV and matrix formats, including licensing information. Therefore the recommended formats are JSON and Neo4j. Our hetio package in Python reads the JSON format, but it is otherwise a simple yet new format. The Neo4j graph database has an established and thriving ecosystem. However, if you would like to access Hetionet without Neo4j, then we suggest the JSON format. The matrix format refers to HetMat archives, which store edge adjacency matrices on disk. Additional usage information is available at the corresponding download locations. -
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istiChartLib
C++ Chart Library for wxWidgets
IstiChartLib is one of the simplest c++ library for making chart or graph. It is developed using wxWidgets library. For windows, please use IstiChartLib.zip. For Linux (tested on Ubuntu) use IstiChartLib_Linux.tar.gz. For detailed documentation, please visit www.firagiel.com Password to extract: firagiel -
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Functy
Functy is a 3D graph drawing package that generates immediate results.
Note: The Functy and libsymbolic code has now moved to GitLab: https://gitlab.com/flypig/functy https://gitlab.com/flypig/libsymbolic This project has been left here for archival purposes. Functy is a 3D graph drawing package. It allows Cartesian, spherical and parametric curve functions to be plotted and altered quickly and easily. This immediacy and the vivid results promote fun exploration of 3D function. Rendering is performed entirely on the GPU to improve visuals and performance. Ubuntu functy PPA: https://launchpad.net/~flypig/+archive/ubuntu/ppa -
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Visualization of Protein-Ligand Graphs
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/ -
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quickplot
interactive 2D plotter
Quickplot is a fast interactive 2D plotter with infinite zooming, value picking, pipe input, and unlimited plots displayed. Quickplot is meant for looking at your data quickly and of secondary importance is making static pictures of your data. -
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Peklo is a graph editor and an environment for visualizing and comparing different algorithms for some graph-theoretic problems, e.g. flows, shortest path, minimum spanning tree.
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ipcvis
Visualize Inter Process Communication
Small python script that can visualize Inter Process Communication on Linux. It can create a graph of TCP and Unix sockets, pipes and also process hierarchy. Short (59 sec) demo visualizing ssh client connecting to ssh server on the same Ubuntu host: http://youtu.be/8XFKwzkexQY Longer (2 min 13 sec) demo visualizing ZoneMinder surveillance solution operation (stopping, starting, enabling and viewing camera): http://youtu.be/kM7klE61Ibk Tested on Ubuntu 14.10 and Debian 7. ... -
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Pyxplot
Graph Plotting Package and Scientific Scripting Language
Pyxplot is a scientific scripting language, graph plotting tool and vector graphics suite. It runs in a command-line environment under Linux, Mac OS X, and other POSIX systems. -
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Chordalysis
Log-linear analysis (data modelling) for high-dimensional data
...However, due to its exponential nature, previous approaches did not allow scale-up to more than a dozen variables. We present here Chordalysis, a log-linear analysis method for big data. Chordalysis exploits recent discoveries in graph theory by representing complex models as compositions of triangular structures, also known as chordal graphs. Chordalysis makes it possible to discover the structure of datasets with thousands of variables on a standard desktop computer. Associated papers at ICDM 2013, ICDM 2014 and SDM 2015 can be found at http://www.francois-petitjean.com/Research/ YourKit is supporting Chordalysis open source project with its full-featured Java Profiler. ... -
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An extensible, real-time, 3D visualization, simulation, and game-design authoring tool. Integrates Java 3D and Eclipse RCP. Drag-&-Drop editing of a complex 3D scene graph. Fast world-building. Web delivery via Webstart or Applets.
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Flexible Brain Graph Visualizer
Matlab code to visualise brain graphs from connectivity matrices
This very configurable script allows you to plot a 3D (MNI space) visualisation of a brain graph, with edges represented by cylinders and vertices represented by spheres. To aid orientation, a cortical mesh can be added, as can convex hull outlines. The colouring and sizing scheme is fully configurable for both edges and vertices. You can see some example output in <http://www.ncbi.nlm.nih.gov/pubmed/22677149> <http://www.ncbi.nlm.nih.gov/pubmed/20541019> <http://www.ncbi.nlm.nih.gov/pubmed/24562717> -
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BasisViewer
Browse and visualize your downloaded Basis Band B1 biometric data
This application allows you to graph your Basis data in several ways and allows you to easily move across dates, plot mulitple attributes simultaneously, and understand trends and answer questions. This application assumes you've already run the BasisRetriever application and downloaded your metrics in csv format. -
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CIG-P
CIG-P is a simple yet flexible data visualization tool
...CIG-P can be used to compare a) different AP-MS datasets of various baits or b) a particular bait under various perturbations (lenticular section CIG-P). The output of CIG-P is a simple and intuitively easy to grasp visualization of a complex dataset. Publication: CIG-P: Cicular Interaction Graph for Proteomics http://www.biomedcentral.com/1471-2105/15/344/ Previously known as PIVOT (Protein Interaction Visualization and Observation Tool)
