Showing 187 open source projects for "format"

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  • 1
    pprof

    pprof

    pprof is a tool for visualization and analysis of profiling data

    pprof is a profiling visualization and analysis tool that ingests profiles in the profile.proto format and generates human-readable and graph-based reports. It supports multiple profile types (CPU, heap, allocations, contention, etc.) and can present data as text tables, call graphs (via Graphviz/dot), flame graphs, and interactive web UIs. The tool helps developers find hot paths, quantify resource usage, and compare profiles across runs to validate performance changes.
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  • 2
    DataQualityDashboard

    DataQualityDashboard

    A tool to help improve data quality standards in data science

    The goal of the Data Quality Dashboard (DQD) project is to design and develop an open-source tool to expose and evaluate observational data quality. This package will run a series of data quality checks against an OMOP CDM instance (currently supports v5.4, v5.3 and v5.2). It systematically runs the checks, evaluates the checks against some pre-specified threshold, and then communicates what was done in a transparent and easily understandable way. The quality checks were organized according...
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  • 3
    Catalyst.jl

    Catalyst.jl

    Chemical reaction network and systems biology interface

    Catalyst.jl is a symbolic modeling package for analysis and high-performance simulation of chemical reaction networks. Catalyst defines symbolic ReactionSystems, which can be created programmatically or easily specified using Catalyst's domain-specific language (DSL). Leveraging ModelingToolkit and Symbolics.jl, Catalyst enables large-scale simulations through auto-vectorization and parallelism. Symbolic ReactionSystems can be used to generate ModelingToolkit-based models, allowing the easy...
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  • 4
    Recommenders

    Recommenders

    Best practices on recommendation systems

    ...The module reco_utils contains functions to simplify common tasks used when developing and evaluating recommender systems. Several utilities are provided in reco_utils to support common tasks such as loading datasets in the format expected by different algorithms, evaluating model outputs, and splitting training/test data. Implementations of several state-of-the-art algorithms are included for self-study and customization in your own applications. Please see the setup guide for more details on setting up your machine locally, on a data science virtual machine (DSVM) or on Azure Databricks. ...
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  • 5
    Jmol

    Jmol

    An interactive viewer for three-dimensional chemical structures.

    Over 1,000,000 page views per month. Jmol/JSmol is a molecular viewer for 3D chemical structures that runs in four independent modes: an HTML5-only web application utilizing jQuery, a Java applet, a stand-alone Java program (Jmol.jar), and a "headless" server-side component (JmolData.jar). Jmol can read many file types, including PDB, CIF, SDF, MOL, PyMOL PSE files, and Spartan files, as well as output from Gaussian, GAMESS, MOPAC, VASP, CRYSTAL, CASTEP, QuantumEspresso, VMD, and many other...
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    Downloads: 545 This Week
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  • 6
    Java Treeview - An Open Source, Extensible Viewer for Microarray Data in the PCL or CDT format
    Downloads: 25 This Week
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  • 7
    mzMatch is a Java collection of small commandline tools specific for metabolomics MS data analysis. The tools are built on top of the PeakML core library, providing mass spectrometry specific functionality and access to the PeakML file format.
    Downloads: 2 This Week
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  • 8
    JaxoDraw

    JaxoDraw

    JaxoDraw: Feynman Diagrams made easy!

    JaxoDraw is a tool to generate Feynman diagrams in a mouse click-and-drag fashion. Graphs can be exported to a variety of graphics formats and arbitrary latex code can be used for labels to produce high-quality publishing-style figures.
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    Downloads: 40 This Week
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  • 9
    qvge

    qvge

    Qt Visual Graph Editor

    qvge is a multiplatform graph editor written in C++/Qt. Its main goal is to make possible visually edit two-dimensional graphs in a simple and intuitive way. Please note that qvge is not a replacement for such a software like Gephi, Graphvis, Dot, yEd, Dia and so on. It is neither a tool for "big data analysis" nor a math application. It is really just a simple graph editor :)
    Downloads: 5 This Week
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  • 10
    DocWire SDK

    DocWire SDK

    Award-winning modern data processing SDK in C++20

    ...It handles nearly 100 file types, empowering efficient text extraction, web data extraction, and document analysis. For businesses, the shift to DocWire SDK signifies a leap forward. It promises comprehensive document format support and the ability to extract valuable insights from email boxes, databases, and websites using cutting-edge AI. DocWire SDK aims to expand its capabilities, focusing on versatile data extraction, platform support, and seamless integration with various systems. DocWire SDK is dedicated to streamlining data processing, reducing development time and costs, and harnessing the potential of AI. ...
    Downloads: 0 This Week
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  • 11
    An innovative Open Source CEP (Complex Event Processing) engine. It implements the event stream processing as a library embeddable in C++ and Perl. You can think of the Complex Event Processing engine as an in-memory database driven by triggers, or a data-flow machine, or a spreadsheet on steroids (and without the GUI part).
    Downloads: 1 This Week
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  • 12
    GLE - Graphics Layout Engine
    GLE is a graphics scripting language designed for creating publication quality graphs, plots, diagrams, figures, and slides. Text can be formatted with LaTeX/TeX markup. Its output formats include EPS, PS, PDF, JPEG, and PNG. GLE can operate as either a command line or GUI application.
    Downloads: 12 This Week
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  • 13
    JLD.jl

    JLD.jl

    Saving and loading julia variables while preserving native types

    JLD, for which files conventionally have the extension .jld, is a widely used format for data storage with the Julia programming language. JLD is a specific "dialect" of HDF5, a cross-platform, multi-language data storage format most frequently used for scientific data. By comparison with "plain" HDF5, JLD files automatically add attributes and naming conventions to preserve type information for each object. For lossless storage of arbitrary Julia objects, the only other complete solution appears to be Julia's serializer, which can be accessed via the serialize and deserialize commands. ...
    Downloads: 0 This Week
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  • 14
    a R package. 'Qair' gives access to data bases used by air quality monitoring associations in France. It also contains functions to manipualte air quality datas.
    Downloads: 0 This Week
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  • 15
    Social Network Visualizer

    Social Network Visualizer

    Social Network Analysis and Visualization software

    Visit our new site: http://socnetv.org Social Network Visualizer (SocNetV) is a social network analysis and visualization application. You can draw a social network (graph/digraph) or load an existing one (GraphML, UCINET, Pajek, etc), compute cohesion, centrality, community and structural equivalence metrics and apply various layout algorithms based on actor centrality or prestige scores (i.e. Eigenvector, Betweenness) or on dynamic models (i.e. Kamada-Kawai spring-embedder)
    Downloads: 8 This Week
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  • 16
    CT4AM

    CT4AM

    Tools for 3D image analysis of additively manufactured parts

    CT4AM is a cross-platform toolkit for 3D-image processing in the domain of additive manufacturing for toolpath visualisation or correlation to tomographic data and related materials science. It is written in C++ and provides small, problem-specific applications for viewing, analysing and visualising of volumetric data from micro-CT scans with respect to the complex process parameters and characteristics of additive manufacturing. Moreover, data analysis and processing of G-code are key...
    Downloads: 0 This Week
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  • 17
    Parkiet

    Parkiet

    Parquet format file GUI editor

    Parquet file viewer and editor written in Java and SWT. It uses Apache Avro library for reading and writing edited parquet files. Only Parquet files with simple data type columns are supported.
    Downloads: 1 This Week
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  • 18
    IIPImage

    IIPImage

    IIPImage is an advanced high-performance image server and client

    IIPImage is a high performance image server and client for viewing, navigating and zooming within high resolution images on the internet. Images in TIFF or JPEG2000 format are efficiently streamed by the server to a choice of clients that can be embedded within a web page.
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    Downloads: 8 This Week
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  • 19
    cogli2

    cogli2

    A simple tool for the visualisation of coarse-grained systems

    cogli2 (formerly known as cogli1) is a simple tool to visualise configurations of coarse-grained simulations. It is straightforward to use and it has a few features that make it very handy to produce publication-ready figures. It supports its own file format but implementing additional parsers is fairly easy. As of now it is not well documented, but this is something we will improve upon in the near future.
    Downloads: 0 This Week
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  • 20
    ...File Update Management Detects new or modified files in the source location. Updates only the changed files at the destination, reducing transfer time and bandwidth usage. CSV-Based Logging: Generates detailed execution logs in CSV format. Benefits: Reduces manual effort in file deployment and updates. Provides traceability through detailed CSV logs.
    Downloads: 0 This Week
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  • 21
    Ngraph-gtk
    The repository was moved to GitHub https://github.com/htrb/ngraph-gtk User's manual https://htrb.github.io/ngraph-gtk/manual/ Japanese web page https://htrb.github.io/homepage/ngraph/ngraph-gtk.html
    Downloads: 0 This Week
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  • 22
    Strings Edit

    Strings Edit

    String editing and formatting library for Ada

    Strings edit is a library that provides I/O facilities for integers, floating-point numbers, Roman numerals, and strings. Both input and output subroutines support string pointers for consequent stream processing. The output can be aligned in a fixed size field with padding. Numeric input can be checked against expected values range to be either saturated or to raise an exception. For floating-point output either relative or absolute output precision can be specified. UTF-8 encoded strings...
    Downloads: 0 This Week
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  • 23
    Charmol

    Charmol

    Program for molecular graphics

    Charmol is a cross-platform GUI/command-line based program for making high-quality pictures of molecular structures, nowadays working on Linux, MacOS and Windows. As output, it produces POV-Ray rendered images or files in VRML format. Charmol is capable of making pictures containing: - from small- to large-size molecules - more molecules together (different settings possible) - orbitals using molden and fchk files (GTO functions up to 'h' angular momentum supported) - surfaces using gaussian cube files (also color-mapped surfaces according to potential) - schematic representation of vibrations using arrows - user-defined arrows representing vectorial properties - measuring gauges - combinations of these features (more orbitals together, orbitals and arrows together etc.) ...
    Downloads: 0 This Week
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  • 24
    libCEED

    libCEED

    CEED Library: Code for Efficient Extensible Discretizations

    ...One of the challenges with high-order methods is that a global sparse matrix is no longer a good representation of a high-order linear operator, both with respect to the FLOPs needed for its evaluation, as well as the memory transfer needed for a matvec. Thus, high-order methods require a new "format" that still represents a linear (or more generally non-linear) operator, but not through a sparse matrix.
    Downloads: 0 This Week
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  • 25
    123VCF

    123VCF

    An Intuitive and Efficient Tool for VCF file filtration

    123VCF has been developed to make the filtration step of VCF files efficient and more importantly easy to understand. It can be used in the most important step of whole exome/genome sequencing data analysis in the research and also clinical settings. User manual: https://dl.adbioinformatics.net/123VCF/123VCF_Manual.ver2.pdf If you use 123VCF, please cite its paper: Eidi, M., Abdolalizadeh, S., Moeini, S. et al. 123VCF: an intuitive and efficient tool for filtering VCF files. BMC...
    Downloads: 4 This Week
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