Search Results for "web-based" - Page 17
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Showing 1250 open source projects for "web-based"
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Grinn
graph database and R package for omic data integration
http://kwanjeeraw.github.io/grinn/ -
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ChunJun
A data integration framework
ChunJun is a distributed integration framework, and currently is based on Apache Flink. It was initially known as FlinkX and renamed ChunJun on February 22, 2022. It can realize data synchronization and calculation between various heterogeneous data sources. ChunJun has been deployed and running stably in thousands of companies so far. Based on the real-time computing engine--Flink, and supports JSON template and SQL script configuration tasks. -
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x-ballistics
a browser based ballistics calculator for arrows and bullets
Browser based ballistics calculator for arrows and bullets: http://www.x-ballistics.eu/app/web/ballistics/index -
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Vaex
Out-of-Core hybrid Apache Arrow/NumPy DataFrame for Python
Data science solutions, insights, dashboards, machine learning, deployment. We start at 100GB. Vaex is a high-performance Python library for lazy Out-of-Core data frames (similar to Pandas), to visualize and explore big tabular datasets. It calculates statistics such as mean, sum, count, standard deviation etc, on an N-dimensional grid for more than a billion (10^9) samples/rows per second. Visualization is done using histograms, density plots and 3d volume rendering, allowing interactive... -
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Clustergrammer
An interactive heatmap visualization built using D3.js
Clustergrammer is a visualization library built using D3.js that enables intuitive interaction with high-dimensional data. Clustergrammer was built with biological data in mind. Clustergrammer is a web-based tool for visualizing high-dimensional data (e.g. a matrix) as an interactive and shareable hierarchically clustered heatmap. Clustergrammer's front end (Clustergrammer-JS) is built using D3.js and its back-end (Clustergrammer-PY) is built using Python. Clustergrammer produces highly interactive visualizations that enable intuitive exploration of high-dimensional data and has several biology-specific features (e.g. enrichment analysis, see Biology-Specific Features) to facilitate the exploration of gene-level biological data. -
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MatNMR is a highly flexible toolbox for processing 1D and 2D NMR/EPR spectra in MATLAB and creating high-quality 1D, 2D or 3D plots. Fully GUI and/or script-based.
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Calculation of camshafts - allows to define a camshaft profile on the set trajectory which should provide the given mechanism. The trajectory can be set graphically, co-ordinates or function.
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JPIV
Particle Image Velocimetry
JPIV is a platform independent, graphical stand-alone application for Particle Image Velocimetry (PIV) written in Java. PIV is an optical technique for measuring fluid flow velocities. JPIV moved to GitHub. Please visit us at: https://eguvep.github.io/jpiv/ -
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Data/Document WF
Data/Document Work Flow application
Data/Document Work Flow is a set of .NET C# libraries to build simple cross-platform information system: - DataWF.Common - collections, reflections, io and networks helpers - DataWF.Data - cross RDBMS ORM - DataWF.Gui - Xwt based desktop UI - DataWF.Data.Gui - Database desktop UI - DataWF.Module.Flow - Document work flow module - DataWF.Mudule.FlowGui - Configure, create, edit, send document throw the flow Sources: https://github.com/alexandrvslv/datawf -
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PHPCI
PHPCI is a free and open source continuous integration tool
PHPCI is a continuous integration (CI) server designed specifically for PHP applications. It automates tasks such as testing, code quality checks, and deployment, helping developers maintain code consistency and detect issues early. PHPCI supports various plugins and tools, including PHPUnit, PHPMD, and Codeception, making it highly customizable for different project needs. -
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Britecharts
Composable Charting Library based on reusable D3.js components
Britecharts is a client-side reusable Charting Library based on D3.js v5 that offers easy and intuitive use of charts and components that can be composed together to create amazing visualizations. Britecharts components have been written in ES2016 with a Test Driven methodology, so they are fully tested, and we are committed to keeping them that way. The typical use of Britecharts involves creating a chart using its simple API, then rendering it on a container that has previously had data applied to it. ... -
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ELINT Alchemist
Plot, analyse and measure ELINT Time-Based data.
This program will open an ELINT Time-Based Data (TBD) file and plot it for purposes of measurement and analysis. Test files included. New ver 0.4 added 2018-01-01. -
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DatacenterManager
UNIX Performance Monitoring / Trend Analysis Java Software
Remotely Inventory and Poll UNIX servers in seconds. (without installing extra software on your servers, just by SSH communication plain old UNIX commands).https://sites.google.com/site/ronuitzaandam/ Your entire datacenter can be automatically inventoried by supplying hostname, username & password for each server, either “one by one” or via an automated CSV host-list import file. This software goes great with other UNIX software like WinSCP and Putty etc !!! -
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isiKnock
In silico knockouts for signaling pathways
...isiKnock is a software to automatically conduct and visualize in silico knockouts for signaling pathways (Hannig et al. 2019). isiKnock predicts the knockout behavior based on the calculation of signal flows at steady state. For an explanation of the concept of in silico knockouts, we refer to Scheidel et al. 2016 and Amstein et al. 2017. Hannig et al. (2019) isiKnock: in silico knockouts in signaling pathways, Bioinformatics, 35(5), 892–894 Amstein et al. (2017) Manatee invariants reveal functional pathways in signaling networks. ... -
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SBML2LaTeX
A documentation and report generator for systems biological models
...SBML2LATEX can also be downloaded and used locally in batch mode or interactively with its Graphical User Interface or several command line options. The purpose of SBML2LATEX is to provide a way to read the contents of XML-based SBML files. This is helpful and important for, e.g., error detection, proofreading and model communication. -
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Dataflow Java SDK
Google Cloud Dataflow provides a simple, powerful model
The Dataflow Java SDK is the open-source Java library that powers Apache Beam pipelines for Google Cloud Dataflow, a serverless and scalable platform for processing large datasets in both batch and stream modes. This SDK allows developers to write Beam-based pipelines in Java and execute them on Dataflow, taking advantage of features like autoscaling, dynamic work rebalancing, and fault-tolerant distributed processing. While it has been mostly succeeded by the unified Beam SDKs, it remains relevant for legacy systems and offers insight into the underlying mechanisms that power scalable data workflows on Google Cloud. -
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Flame Graphs
Stack trace visualizer
...The top edge shows what is on-CPU, and beneath it is its ancestry. The colors are usually not significant, picked randomly to differentiate frames. Flame charts were first added by Google Chrome's WebKit Web Inspector (bug). While inspired by flame graphs, flame charts put the passage of time on the x-axis instead of the alphabet. -
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FractalNow
Fast, advanced, multi-platform fractal generator
FractalNow provides users with tools to generate pictures of various types of fractals quickly and easily. It is made of both a command line tool, FractalNow, and a graphical tool, QFractalNow. The graphical tool, based on Qt library, allows users to explore fractals intuitively and generate pictures. Both tools are entirely multi-threaded and implement advanced algorithms and heuristics that make computation very fast compared to most existing free fractal generators. -
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GlycoPAT
Comprehensive, open-source tool for glycoproteomics MS data analysis
GlycoPAT is a modular, open-source MATLAB based toolbox for shotgun mass spectrometry based glycoproteomics data analysis. This program provides a novel platform for the streamlined analysis of traditional LC-MSn based high-throughput experimental data for the identification of site-specific N- and O-linked glycosylation on various proteins. More details are available at https://www.VirtualGlycome.org/glycopat Source code also available at https://github.com/kaichengub/GlycoPAT If you use this software please cite: Gang Liu, Kai Cheng, Chi Y. ... -
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Canvas-2DGC
A user-extensible Freemat based 1DGC and GCxGC data analysis software.
Canvas-2DGC is a user-extensible, Freemat based 1DGC and comprehensive 2DGC (GCxGC) data visualization and processing software. GCxGC-MS data analysis is supported for Agilent GCMS data format. The first goal of this project is to provide a highly intelligent analytical tool for reducing a complex chromatographic data analysis, either 1D or 2D, to just a few simple and intuitive steps. -
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Pi-Trav
An interactive pi walk.
A simulation and visualization of random walks based on the digits pi. This program also has a settings menu. -
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A spring-based 3D graph layout tool written in Java. Rendering is performed in OpenGL via the JOGL library.
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ctioga2
polymorphic plotting program
ctioga2 is a plotting program in the spirit of gnuplot. It can be used either directly on command-line or writing command files (or a mix of both). It produces publication-quality PDF files. It is based on the Tioga plotting library. -
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DataCleaner
Data quality analysis, profiling, cleansing, duplicate detection +more
DataCleaner is a data quality analysis application and a solution platform for DQ solutions. It's core is a strong data profiling engine, which is extensible and thereby adds data cleansing, transformations, enrichment, deduplication, matching and merging. Website: http://datacleaner.github.io -
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MOIRAI
Simple Scientific Workflow System for CAGE Analysis
Cap analysis of gene expression (CAGE) is a sequencing based technology to capture the 5’ ends of RNAs in a biological sample. After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data. ...
