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Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools.
The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm.
VPLG is command line software.
GWT Highcharts is a freely available open source library that provides an elegant and feature complete approach for including Highcharts and Highstock visualizations within a GWT application using pure Java code.
Note: the source code for this project is now being maintained on GitHub here: https://github.com/squinn/gwt-highcharts
NOTE: developement of this project has moved to GitHub http://github.org/matthuska/biasviz/
BiasViz is a Java applet for visualization of amino acid bias in multiple sequence alignments.
3D viewer which arranges BLAST hits and other bioinformatics-related alignments in a rotating, cylindrical display. Feedback appreciated. NOTE: requires Java3d installation.
Superceded by Cylindrical Alignment App
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ServiceNow Data Mart Loader (a.k.a. ServiceNow Data Pump)
...ServiceNow DataPump) is a Java application which uses ServiceNow’s Direct Web Services (SOAP) API to extract meta-data and data from your Service-now ITSM instance. The application automatically creates and maintains tables in an Oracle or MySQL database.
Please view the Wiki Quick Start Guide for instructions.
NOTE:
This project has been rehosted on github (see https://github.com/gflewis/sndml). The updated version has been tested with Geneva and Helsinki, but the GUI is no longer supported.
Evoker is a graphical tool for plotting genotype intensity data in order to assess quality of genotype calls. It implements a compact, binary format which allows rapid access to data, even with hundreds of thousands of observations.
PLEASE NOTE: This source repository is no longer active. See the github link above for the latest version.
A group a subprojects for Data Cleaning projects, mainly as a step of a Data Mining Project. Visit www.datacleaningopensource.com to review our current applications or if you want to add yours. NOTE: PROGRAMMING SKILLS ARE REQUIRED.
Visually build and simulate boolean logic circuits
Visually build boolean logic circuits and then simulate their operation. Create custom components from user-designed circuits. Written in Java for cross-platform functionality.
NOTE: This project has moved to Bitbucket at http://bitbucket.org/kwellwood/circuitsandbox
Interna is a billing software able to manage customer- and productrelated data and statistics. The document managment is able to generate the types quotation, order confirmation, delivery note, invoice and credit advice in english and german.
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bitHull is a Simple unstructured data store-and-share mechanism. It is part experimental graph-based task/note/idea management system and part data aggregator.