Showing 1025 open source projects for "open-shell"

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  • 1
    Parkiet

    Parkiet

    Parquet format file GUI editor

    Parquet file viewer and editor written in Java and SWT. It uses Apache Avro library for reading and writing edited parquet files. Only Parquet files with simple data type columns are supported.
    Downloads: 0 This Week
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  • 2

    Stanford Data Miner

    Tools for integration and analysis of heterogeneous immunological data

    ...Sherpa uses Seam, a platform integrating Asynchronous JavaScript and XML (AJAX), JavaServer Faces (JSF), the Java Persistence API (JPA), and Enterprise Java Beans (EJB) 3.0. The data exploration app is an open source business intelligence product called JasperServer (version 3.7), customized through supported configuration changes. Both apps use MySQL for back-end data persistence. Currently, the documentation contained herein is not intended to provide comprehensive instructions on installing and configuring the system. Please contact a project administrator for more information.
    Downloads: 0 This Week
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  • 3
    A "gumbo" of tools and concepts supporting rich client applications with 2D/3D user interfaces. Expands on the code from the book "3D User Interfaces with Java 3D", and includes a generous contribution of RCP code from Meyer Sound. Recent work includes a Norden bombsight simulator, with terrain rendering based on NASA's WorldWind SDK. For this effort YourKit has generously made available its full-featured Java Profiler (https://www.yourkit.com/java/profiler/index.jsp), which has proved...
    Downloads: 0 This Week
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  • 4
    Dependency Finder
    Extracts dependencies and OO metrics from Java class files produced by most Java compilers. Computes API differences between versions. No source needed. Includes both Swing and command-line interfaces, with XSL stylesheets for formatting output.
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    Downloads: 0 This Week
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  • 5
    mzMatch is a Java collection of small commandline tools specific for metabolomics MS data analysis. The tools are built on top of the PeakML core library, providing mass spectrometry specific functionality and access to the PeakML file format.
    Downloads: 0 This Week
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  • 6
    FlexiList.

    FlexiList.

    FlexiList is a Java data structure that combines the benefits of array

    FlexiList is a Java data structure that combines the benefits of arrays and linked lists. Like an array, it allows for efficient access to elements by index. Like a linked list, it allows for efficient insertion and deletion of elements at any position in the list. Benefits Over Arrays and ArrayList ->Efficient Insertion and Deletion: FlexiList can insert or delete nodes at any position in the list in O(1) time, whereas arrays require shifting all elements after the insertion or deletion...
    Downloads: 0 This Week
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  • 7

    Billiards Covers

    This zip jar contains the current coverings of periodic paths.

    Researchers, Mathematicians and Enthusiasts. Download "Billiards Covers" to see the most current list of periodic paths in triangles. Download "Billiards Everything" to discover new periodic billiard paths, an unresolved problem from 1775! Follow "The Great Periodic Path Hunt" at gwtokarsky.github.io for the latest news. Email tokarsky@ualberta.ca for feedback.
    Downloads: 0 This Week
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  • 8
    Autoplot

    Autoplot

    Autoplot is an interactive browser for data on the web

    Autoplot is an interactive browser for data on the web. Give Autoplot a URL or local file name and it creates a sensible plot of the data. Autoplot allows you to interactively browse data stored in ascii, .cdf, netcdf, and many other formats. Autoplot's source has been moved to GitHub. Thanks to SourceForge for many years of hosting!
    Downloads: 0 This Week
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  • 9
    TurboVNC

    TurboVNC

    High-speed, 3D-friendly, TightVNC-compatible remote desktop software

    TurboVNC is a high-performance, enterprise-quality version of VNC based on TightVNC, TigerVNC, and X.org. It contains a variant of Tight encoding that is tuned for maximum performance and compression with 3D applications (VirtualGL), video, and other image-intensive workloads. TurboVNC, in combination with VirtualGL, provides a complete solution for remotely displaying 3D applications with interactive performance. TurboVNC's high-speed encoding methods have been adopted by TigerVNC and...
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    Downloads: 128,198 This Week
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  • 10
    Mjograph is an XY (2D) graph editor that runs on Mac OSX and Java with the goal to provide researchers with a quick way to visualize numerical data and also create publication-quality plots.
    Downloads: 10 This Week
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  • 11
    123VCF

    123VCF

    An Intuitive and Efficient Tool for VCF file filtration

    123VCF has been developed to make the filtration step of VCF files efficient and more importantly easy to understand. It can be used in the most important step of whole exome/genome sequencing data analysis in the research and also clinical settings. User manual: https://dl.adbioinformatics.net/123VCF/123VCF_Manual.ver2.pdf If you use 123VCF, please cite its paper: Eidi, M., Abdolalizadeh, S., Moeini, S. et al. 123VCF: an intuitive and efficient tool for filtering VCF files. BMC...
    Downloads: 2 This Week
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  • 12

    GETL

    ETL engine based on Groovy

    ...All routine work ETL should be automated wherever possible; 4. Compiling the code on the fly bail speed and reserve for the optimization; 5. Sophisticated class hierarchy guarantee easy connection of other open source solutions.
    Downloads: 0 This Week
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  • 13
    FreeMind

    FreeMind

    A premier mind-mapping software written in Java

    A mind mapper, and at the same time an easy-to-operate hierarchical editor with strong emphasis on folding. These two are not really two different things, just two different descriptions of a single application. Often used for knowledge and content management.
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    Downloads: 2,900 This Week
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  • 14
    jOcular

    jOcular

    Optical Design Software for simulating systems of lenses, prisms, etc.

    Optical Design Software for optical systems comprised of light sources, lenses, apertures, prisms, imagers, photometers, etc. Simulate light through the system and compute images and intensities at various locations in the design.
    Downloads: 2 This Week
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  • 15
    DataGym.ai

    DataGym.ai

    Open source annotation and labeling tool for image and video assets

    DATAGYM enables data scientists and machine learning experts to label images up to 10x faster. AI-assisted annotation tools reduce manual labeling effort, give you more time to finetune ML models and speed up your go to market of new products. Accelerate your computer vision projects by cutting down data preparation time up to 50%. A machine learning model is only as good as its training data. DATAGYM is an end-to-end workbench to create, annotate, manage, and export the right training data...
    Downloads: 0 This Week
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  • 16
    Scaffold Hunter
    Scaffold Hunter is a JAVA-based software tool for the analysis of structure-related biochemical data. It enables generation of and navigation in a scaffold tree hierarchy annotated with various data.
    Downloads: 0 This Week
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  • 17
    Aestel

    Aestel

    Applications for data management

    "Information is data in action", and, consequently, having good quality data is essential. The AESTEL package contains two highly configurable applications for data management: A data loader and a reporting application, i.e. DataLoader and AEREA, respectively. The data loader application applies user-defined instructions to validate, process and load data. The reporting application provides a query builder and spreadsheet template designer. Both applications work with any relational data...
    Downloads: 0 This Week
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  • 18
    Amazon Kinesis Flink Connectors

    Amazon Kinesis Flink Connectors

    Contains various Apache Flink connectors to connect to AWS data

    This library contains various Apache Flink connectors to connect to AWS data sources and sinks. This repository contains various Apache Flink connectors to connect to AWS Kinesis data sources and sinks. Flink maintain backwards compatibility for the Sink interface used by the Firehose Producer. This project is compatible with Flink 1.x, there is no guarantee it will support Flink 2.x should it release in the future. An Apache Flink application is a Java or Scala application that is created...
    Downloads: 0 This Week
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  • 19

    modnlp-plugins

    External plugins for modnlp/teccli

    This is a general project for modnlp/teccli plugins, with focus on text visualizaton.
    Downloads: 0 This Week
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  • 20
    DataMelt

    DataMelt

    Computation and Visualization environment

    DataMelt (or "DMelt") is an environment for numeric computation, data analysis, computational statistics, and data visualization. This Java multiplatform program is integrated with several scripting languages such as Jython (Python), Groovy, JRuby, BeanShell. DMelt can be used to plot functions and data in 2D and 3D, perform statistical tests, data mining, numeric computations, function minimization, linear algebra, solving systems of linear and differential equations. Linear, non-linear...
    Downloads: 6 This Week
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  • 21
    Gephi

    Gephi

    Gephi the open graph Viz platform

    Gephi is the leading visualization and exploration software for all kinds of graphs and networks. Gephi is open-source and free. Gephi is an award-winning open-source platform for visualizing and manipulating large graphs. It runs on Windows, Mac OS X and Linux. Localization is available in English, French, Spanish, Japanese, Russian, Brazilian Portuguese, Chinese, Czech and German. Fast Powered by a built-in OpenGL engine, Gephi is able to push the envelope with very large networks. ...
    Downloads: 32 This Week
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  • 22

    PortdataVisualization

    Diagrammatic visualization of Port data

    This project is a “proof-of-concept” prototype that used diagrammatic visualization for presenting multi-dimensional port data, in relation to local and global events. The visualization emphasizes relations between land-side and wharf-side elements and thus conveys derivable knowledge on labor productivity and efficiency. It can be used to convey commodity flows through the port and state, modes of transport, facilities and their capacities, operational characteristics, intermodal...
    Downloads: 8 This Week
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  • 23
    BitSail

    BitSail

    BitSail is a distributed high-performance data integration engine

    BitSail is ByteDance's open source data integration engine which is based on distributed architecture and provides high performance. It supports data synchronization between multiple heterogeneous data sources, and provides global data integration solutions in batch, streaming, and incremental scenarios. At present, it serves almost all business lines in ByteDance, such as Douyin, Toutiao, etc., and synchronizes hundreds of trillions of data every day.
    Downloads: 0 This Week
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  • 24

    Tree Visualisation with Visual Cues

    Tree Visualisation with Visual Cues

    This project extends a previous work on node link tree visualisation and interaction by providing visual clues on hidden structures. We adopt DOITree from Prefuse package (https://github.com/prefuse/Prefuse), a multi-focal tree layout algorithm, for exploring large hierarchical structures. Related publications: https://www.sciencedirect.com/science/article/pii/S1045926X1630009X https://ieeexplore.ieee.org/stamp/stamp.jsp?arnumber=6902871
    Downloads: 2 This Week
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  • 25

    Divide and Conquer Treemaps

    Divide and Conquer Treemap Visualisation

    The project develops new new techniques and algorithms for quickly partitioning and visualizing very large hierarchical structures within a variety of arbitrary shapes and space using Divide and Conquer approach for Treemaps. Related publications: https://www.sciencedirect.com/science/article/pii/S1045926X1500066X https://dl.acm.org/doi/pdf/10.1145/2493102.2493112
    Downloads: 1 This Week
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