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mzMatch is a Java collection of small commandline tools specific for metabolomics MS data analysis. The tools are built on top of the PeakML core library, providing mass spectrometry specific functionality and access to the PeakML file format.
giv, The G(reat|tk|NU) Image Viewer, is a 8-bit to 32-bit and floating point image and vector viewer for gtk+. It is designed especially for scientific vision and computational geometry and has support for drawing vector graphics on top of an image.
toptools convert and display files from the Tevion (Medion) digital notebook MD85276 (like a01.top) or the Aiptek mynote premium to SVG or PS files. There is top2ps top2svg and topviewer currently available; Help is greatly appreciated
Matlab/Octave to Python conversion facility. The tool will take existing scripts
and convert them to Python. Also includes Python bindings to Octave and
a small runtime support library. Built on top of Numeric Python extensions.
Template database is a novel relational database that provides schema freedom. The current implementation is on top of PostgreSQL. It has interesting properties that make it suitable for data analysis / annotation / modeling.