Showing 7 open source projects for "microscope"

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  • 1
    ReViMS

    ReViMS

    ReViMS, a 3D volume rendering tool for light-sheet/confocal microscopy

    ...ReViMS requires a z-stack of 2D binary masks, obtained by segmenting a sequence of fluorescent images acquired by scanning the aggregate along the z axis, using a confocal or a light-sheet fluorescent microscope. It provides a number of tools for: (a) segmenting z-stacks of fluorescence images; (b) reconstructing the 3D surface of the aggregates and estimating several features (including the volume). ReViMS is written in MATLAB (The MathWorks, Inc., Massachusetts, USA). It is an open-source tool and the source code is freely available at: http://sourceforge.net/p/revims Requirements: MATLAB R2017b and Image Processing Toolbox 10.1 or later versions.
    Downloads: 0 This Week
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  • 2
    SPIW - Scanning Probe Image Wizard

    SPIW - Scanning Probe Image Wizard

    Scanning Probe Image Wizard - MATLAB Toolbox

    SPIW is a MATLAB toolbox, for automated processing of scanning probe microscope images. Tools are applicable to all SPM images, but the main focus is on images with atomic or molecular resolution. SPIW is primarily a MATLAB toolbox with functions designed to be called in a user's own script. SPIW also has a very basic GUI for browsing and exporting images. For information on SPIW's performance see our publication ( http://dx.doi.org/10.1063/1.4827076 ) in the Review of Scientific Instruments. ...
    Downloads: 0 This Week
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  • 3
    JohanneumSTM

    JohanneumSTM

    Data logging and visualization in 2D and 3D for STMs.

    This is a project we - ten students, 16 to 18 years old, and one teacher - are currently working on in the so called "Physik-Projektkurs" at school in which we build and program our own scanning tunneling microscope. This software is designed for DAQ systems by BMCM (we use the USB-AD16F), but it should not be too difficult to adapt it to foreign systems.It currently supports resolutions up to 1024x1024, visualization in 2D and 3D using colors from predefined gradients, export to PNG, CSV, OBJ and more! Requires at least .Net Framework 4.0, DirectX 9, optional: BMCM driver for your DAQ system
    Downloads: 0 This Week
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  • 4
    MATLAB GUI and code to map cell distribution around smooth spherical microcarriers beads from laser scanning confocal microscope images
    Downloads: 0 This Week
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  • 5
    This toolkit allows complete control of a microscopy setup from Labview, Matlab, Scilab, Python, .Net, VB, IgorPro, Mathematica and more. Included is a standalone program for image acquisition and scripting control of a scientific microscope.
    Downloads: 0 This Week
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  • 6
    The virtual lab is a NASA-funded project to provide simulated instrumentation. ITG has developed a Virtual Microscope (Virtual SEM and LM) for viewing high-resolution, multi-dimensional image datasets. More info and data: http://virtual.itg.uiuc.edu
    Downloads: 3 This Week
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  • 7
    A set of user-friendly software to access and manipulate the Intel Play QX3 microscope.
    Downloads: 0 This Week
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