Search Results for "data capture framework" - Page 8
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Showing 367 open source projects for "data capture framework"
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optPBN
An optimization toolbox for probabilistic Boolean networks
We introduce optPBN, a Matlab-based toolbox for the optimization of probabilistic Boolean networks (PBN) which operates under the framework of the BN/PBN toolbox from Shmulevich et al. optPBN offers an easy generation of probabilistic Boolean networks from Boolean rule-based modeling and allows for flexible measurement data integration from multiple experiments and a subsequent integrated optimization problem generation which then can be solved with different optimizers. ... -
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DSAquire
Data aquasition software for Thurlby DSA524
DSAquire allows you to download and plot trace data from a Thurlby DSA524 digital storage adaptor (it's a 25 year old instrument, but better late than never, eh?). The data is downloaded via an RS232 serial link using a null modem cable. You can export the plot as an image or export the data in real-world units as a csv file. This software runs under Linux and also under Windows XP and later using Cygwin. Pre-compiled binaries are supplied, as are full sources under the GPL. The... -
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Python Open Source Echosounder Toolkit
real-time visualization of network data broadcasts from echosounders
During acoustic surveys of marine ecosystems, fisheries scientists need to quickly interpret large amounts of echosounder data and decide whether and where to sample for targeted organisms. The Python Open Source Echosounder Toolkit (pyOSET) was designed to facilitate this process by providing near real-time visualization of network data broadcasts from multiple echosounder systems, and to serve as a framework for implementation of algorithms to detect, locate, and identify fish or the seabed. ... -
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Pentaho Data Integration
Pentaho Data Integration ( ETL ) a.k.a Kettle
Pentaho Data Integration uses the Maven framework. Project distribution archive is produced under the assemblies module. Core implementation, database dialog, user interface, PDI engine, PDI engine extensions, PDI core plugins, and integration tests. Maven, version 3+, and Java JDK 1.8 are requisites. Use of the Pentaho checkstyle format (via mvn checkstyle:check and reviewing the report) and developing working Unit Tests helps to ensure that pull requests for bugs and improvements are processed quickly. ... -
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scipion-xmipp
Image processing framework to integrate EM software packages.
Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM). It integrates several software packages and presents an unified interface for both biologists and developers. Scipion allows to execute workflows combining different software tools, while taking care of formats and conversions. Additionally, all steps are tracked and can be reproduced later on. Xmipp is a well-known package in the EM image processing. It is integrated... -
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Roomba
A Node.js tool to examine the correctness of Open Data Metadata
...This approach applies several techniques to check the validity of the attached metadata as well as providing descriptive and statistical information of a certain dataset as well as a whole data portal. Using our framework on prominent data portals shows that the general state of the Linked Open Data needs attention as most of datasets suffer from bad quality metadata and lack additional informative metrics. -
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chipexo
model based analysis of ChIP-exo data
Here we developed a novel analysis framework named MACE (model-based analysis of ChIP-exo) dedicated to ChIP-exo data analysis. MACExo has the following four steps: 1) sequencing data normalization and bias correction; 2) signal consolidation and noise reduction; 3) single nucleotide resolution border detection using Chebyshev Inequality; and 4) border matching using Gale-Shapley’s stable matching algorithm. -
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Framework for developing web-based applications (CMS, portals, ERPs etc.) It includes multilanguage support, permits management, MVC mini framework, package structure, template engine, javascript library, simple GUI library, caching system, captcha.
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PDI Data Vault framework
Data Vault loading automation using Pentaho Data Integration.
A metadata driven 'tool' to automate loading a designed Data Vault. It consists of a set of Pentaho Data Integration and database objects. Thel Virtual Machine (VMware) is a 64 bit Ubuntu Server 14.04, with MySQL (Percona Server) and PostgreSQL 9.4 as the database flavours and PDI version 5.2 CE. NB: Directory version_2.4 contains the most recent Virtual Machine. The readme.txt contains info about that VM. -
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adc2pc
Capture & visualize digital measurements on PC
Application was designed to provide user a capability to visualize ADC measurements flow on PC monitor and to save data on a hard disk. At a present moment application uses serial port connection for data capturing. That is why at first you should provide all hardware drivers and other resources for ADC that allow to communicate with PC. -
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TrollEditor
Editor of virtual worlds.
...It is based on Ogre3D (graphics engine), Bullet (physics engine), PhysX (physics engine), OpenAL (3D sound and music), OpenCV (image analysis and camera model) and Boost (threading and python binding). It uses Python for scripting, as well as built in simple scripting language. Some features: - built in multiplayer - incorporating data from different sensors (IMU, AHRS, Razer Hydra) - image server/client - built in support for motion capture data analysis - path finding using data from physics engine (backwave propagation algorithm) - built in XML parser - graphical world editor - plugins system (C++) -
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ckon
automatic build tool for ROOT data analysis software
ckon is a C++ program/tool which automatically takes care of compilation, dictionary generation and linking of programs and libraries developed for data analyses within the CERN ROOT analysis framework. This includes parsing include headers to figure out which libraries the main programs need to be linked to. It uses automake/autoconf to be platform independent and GNU install compliant. In addition, m4 macros are automatically downloaded and the according compiler flags included based on a list of boost libraries provided in the config file. -
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Chordalysis
Log-linear analysis (data modelling) for high-dimensional data
===== Project moved to https://github.com/fpetitjean/Chordalysis ===== Log-linear analysis is the statistical method used to capture multi-way relationships between variables. However, due to its exponential nature, previous approaches did not allow scale-up to more than a dozen variables. We present here Chordalysis, a log-linear analysis method for big data. Chordalysis exploits recent discoveries in graph theory by representing complex models as compositions of triangular structures, also known as chordal graphs. ... -
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Xmind
The most popular mindmapping and brainstorming software
Professional and powerful brainstorming and mind mapping software tool, open source, Eclipse Community Award winner, often used for capture ideas, knowledge/project management and GTD, supporting fishbones/org-charts/tree charts/spreadsheets, easy-to-use. -
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libsvo
A experimental framework to generate and raycast Sparse Voxel Octrees.
A experimental framework, based on the gloost framework, to generate and raycast Sparse Voxel Octrees. This project is heavily relying on the gloost framework. -
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SFrame is a C++ framework built around the ROOT libraries for analysing particle physics data. It gives a very high performance for processing data, by allowing the user to run his/her code on a distributed farm of machines.
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BIRT Report Designer
Open Source Reporting & Data Visualization Platform
...With a flexible Open Data Access framework, developers can write custom data drivers to access data from any source, including Big Data sources like Apache Hadoop, Cassandra, and MongoDB, along with all traditional relational databases, Flat Files, XML data streams, and data stored in proprietary systems. Built for embedding, BIRT includes APIs for data access, chart generation, output formats, content execution, and integration within larger applications. -
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Streams for IBM i
Batch performance boosting and Big Data framework for IBM i
Streamd for IBM i is a suite of tools for IBM i (previously known as AS/400 and iSeries) that can significantly improve performance characteristics of batch processes. Due to extensive use of parallel programming techniques Streams for IBM i delivers significant performance improvements for single streamed batch jobs. Streams for IBM i can split an existing batch process into a number of concurrent streams, completely eliminate backup-related delays, introduce new robust recovery policies... -
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Tockit tries to build a framework for Conceptual Knowledge Processing (CKP) and Formal Concept Analysis (FCA) in Java, using a component-based approach, XML formats and a three-tier architecture.
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Virtual instrumentation software, currently designed for modifying automobile engines. Intended as a modular framework to communicate with devices on an IO port (serial, parallel etc.) and allow a visual representation of the instrument.
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Code Runner is a powerful framework for automating the running and data analysis of large codes and simulations, working anywhere from laptops to HPC clusters.
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Java GUI Framework seeks to simplify the development procedures of Java GUI ,which can directly collect data for the object model from input interface and seamlessly link up ORM technology.
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Arthropod Easy Capture
An arthropod specific, specimen level data capture application
Arthropod Easy Capture (AEC) is an arthropod specific, open-source solution for handling specimen level host interactions. Developed in conjunction with the Plant Bugs Planetary Biodiversity, Tri-Tropic Interactions TCN, and Bee Database projects, AEC is designed for rapid, and accurate data capture, utilizing controlled vocabularies to maintain data quality. -
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Pyphant is a framework for scientific data analysis. It features a flexible plugin architecture allowing for the application in many different fields. For the analysis a graph of processing steps is constructed, that can be applied via the cli as well.
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pyMantis is a data-management system for (systems) biology build on the web2py framework. It features: tree based file explorer, relational db table wizzard with automated creation of user interfaces, internal and external access management, wiki, ..
