Search Results for "graph visualization" - Page 3
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Showing 186 open source projects for "graph visualization"
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StellarGraph
Machine Learning on Graphs
StellarGraph is a Python library for machine learning on graphs and networks. The StellarGraph library offers state-of-the-art algorithms for graph machine learning, making it easy to discover patterns and answer questions about graph-structured data. It can solve many machine learning tasks. Graph-structured data represent entities as nodes (or vertices) and relationships between them as edges (or links), and can include data associated with either as attributes. For example, a graph can... -
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graphdot
Visualize Go module dependencies in Graphviz DOT format
Visualize Go module dependencies in Graphviz DOT format. Run graphdot in the directory of any project using Go modules with a go.mod file to print out a dependency graph in Graphviz DOT format. The output can be piped directly into dot to generate a PNG image file. For large graphs with many nodes of dependencies, you may want to generate an SVG file to allow you to zoom in with high fidelity and save disk space instead. If you like a more UML'ish style, you can use the provided graph... -
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Pigale is a graph editor and a C++ algorithm library essentially concerned with planar graphs. This software, particularly intended for graph theoretical research, includes new algorithms based on our recent theoretical researches.
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xeogl
A WebGL-based 3D engine for technical visualization
xeogl is an open source JavaScript library from xeolabs for 3D model visualization on WebGL. It gives you tools to create interactive 3D worlds in your browser. Load models from formats like glTF or OBJ, or generate them programmatically. Navigate them with the camera and script them with Javascript, to build compelling 3D presentations. Load multiple models. Isolate/move/emphasize objects. Camera navigation controls. Camera animations (flyto, follow, path etc). Emphasis effects (wireframe,... -
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Novembre
STM data analysis
A tool for visualisation and analysis of STM and STS results. Currently supports RHK, WinSPM, Nanonis and Createc file formats. Other formats can be added. Tools are made available by plugins and are currently focused on spectroscopy manipulation. -
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Flame Graphs
Stack trace visualizer
Flame graphs are a visualization of profiled software, allowing the most frequent code-paths to be identified quickly and accurately. They can be generated using my open source programs, which create interactive SVGs. See the Updates section for other implementations. Recently I've been helping with d3-flame-graph. The x-axis shows the stack profile population, sorted alphabetically (it is not the passage of time), and the y-axis shows stack depth, counting from zero at the bottom. ... -
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A spring-based 3D graph layout tool written in Java. Rendering is performed in OpenGL via the JOGL library.
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EntOpt Layout
Relative entropy optimization network layout plugin
The goal of this project is to implement a graph layout / network visualization algorithm as a Java plugin for Cytoscape (http://cytoscape.org/), using a recently published relative entropy optimization based method, called Unified Data Representation (Kovács IA et al. Sci Rep. 2015). If you are using the plugin, please cite: Ágg B, Császár A, Szalay-Bekő M, Veres DV, Mizsei R, Ferdinandy P, Csermely P and Kovács IA (2019) The EntOptLayout Cytoscape plug-in for the efficient visualization of major protein complexes in protein-protein interaction and signalling networks, Bioinformatics 35(21):4490-4492 https://academic.oup.com/bioinformatics/article/35/21/4490/5475596 Our detailed Tutorial on the use of the plugin: https://suopte.com/entopt_2_1_tutorial_20200518.pdf A video about the version 2.1: http://suopte.com/entopt_2_1_tutorial_video.mp4 Don't hesitate to send any questions, comments or bug reports also to agg.bence {at} med.semmelweis-univ.hu. -
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vizceral
WebGL visualization for displaying animated traffic graphs
vizceral is a component for displaying traffic data on a webgl canvas. If a graph of nodes and edges with data about traffic volume is provided, it will render a traffic graph animating the connection volume between nodes. This component can take multiple traffic graphs and will generate a 'global' graph showing all incoming traffic into each of the 'regions', with support for cross-region traffic. There are three levels of information, global, regional, and service-level, with clicking or... -
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React Trend
Simple, elegant spark lines
Unfortunately, none of this project's authors have the time/enthusiasm to maintain this project right now. We recommend forking this project, or reading its source to learn how it's built). Graphing tools are often complex, abstract, and heavy. They require domain-specific knowledge and significant time investment. While building rich data visualizations for an analytics app, is a necessary cost. But what if you just need a sparkline that shows a trend? These are very simple and elegant... -
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Excel to Graphviz
Create graphviz diagrams with excel
Free, easy to use, excel tool to create data and process flow diagrams with table data In separate excel sheets you define items(nodes), lines(edges) and grouping(clusters) Separate definition of node, edge and cluster styles Graph settings sheet Output control sheet Examples and readme are included in the zip file Get it working: -Install graphviz (http://graphviz.org/Download.php) -Download Excel to Graphviz -Open one of the ExcelToGraphviz workbooks -Go to sheet settings... -
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istiChartLib
C++ Chart Library for wxWidgets
IstiChartLib is one of the simplest c++ library for making chart or graph. It is developed using wxWidgets library. For windows, please use IstiChartLib.zip. For Linux (tested on Ubuntu) use IstiChartLib_Linux.tar.gz. For detailed documentation, please visit www.firagiel.com Password to extract: firagiel -
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Graphixy - Image Data Extraction
Scientific, Engineering and Statistical Graphing data extraction tool
Graphixy is a freeware and lighter (140 KB) standalone program designed to get 'x' and 'y' graphical co-ordinates of an image in scientific, engineering & statistical applications and in image data processing. By drawing an image (or) hovering mouse over the pre-loaded image (using Load option), the 'x' and 'y' co-ordinates can be recorded and saved as notepad .txt file The saved data can be exported to Excel spreadsheet and viewed in graph format. Drawn images can be replayed from the... -
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Visualization of Protein-Ligand Graphs
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/ -
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Functy
Functy is a 3D graph drawing package that generates immediate results.
Note: The Functy and libsymbolic code has now moved to GitLab: https://gitlab.com/flypig/functy https://gitlab.com/flypig/libsymbolic This project has been left here for archival purposes. Functy is a 3D graph drawing package. It allows Cartesian, spherical and parametric curve functions to be plotted and altered quickly and easily. This immediacy and the vivid results promote fun exploration of 3D function. Rendering is performed entirely on the GPU to improve visuals and... -
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Glimpse Plotting Library
WPF Plotting Library
Glimpse is a .NET 4.6 plotting library for WPF projects. It currently contains five classes: a scatter plot, a line graph, an histogram, a raster plot to display matrix data and a tree plot to visualize recursive XML data. Main attributes can be customized through the respective constructors, additional changes are available through public properties. To use the packaged classes just reference the library in your project, instantiate a new plot and add it to a display container of your choice. -
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Biorec - Bioreactor controller
Bioreactor control software for BioFlo® fermentors
Biorec is an open source control software written for Windows operating systems to provide data logging, process monitoring and control for pilot and laboratory scale BioFlo® series (Eppendorf AG, Hamburg/Germany) fermentors/bioreactors. The supported models are BioFlo® III and BioFlo® 3000 (other models have not been tested in action). Biorec supports process automation through a user programming environment that allows controlling pumps, temperature or agitation by mathematical... -
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quickplot
interactive 2D plotter
Quickplot is a fast interactive 2D plotter with infinite zooming, value picking, pipe input, and unlimited plots displayed. Quickplot is meant for looking at your data quickly and of secondary importance is making static pictures of your data. -
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Peklo is a graph editor and an environment for visualizing and comparing different algorithms for some graph-theoretic problems, e.g. flows, shortest path, minimum spanning tree.
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ipcvis
Visualize Inter Process Communication
Small python script that can visualize Inter Process Communication on Linux. It can create a graph of TCP and Unix sockets, pipes and also process hierarchy. Short (59 sec) demo visualizing ssh client connecting to ssh server on the same Ubuntu host: http://youtu.be/8XFKwzkexQY Longer (2 min 13 sec) demo visualizing ZoneMinder surveillance solution operation (stopping, starting, enabling and viewing camera): http://youtu.be/kM7klE61Ibk Tested on Ubuntu 14.10 and Debian... -
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Pyxplot
Graph Plotting Package and Scientific Scripting Language
Pyxplot is a scientific scripting language, graph plotting tool and vector graphics suite. It runs in a command-line environment under Linux, Mac OS X, and other POSIX systems. -
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An extensible, real-time, 3D visualization, simulation, and game-design authoring tool. Integrates Java 3D and Eclipse RCP. Drag-&-Drop editing of a complex 3D scene graph. Fast world-building. Web delivery via Webstart or Applets.
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Flexible Brain Graph Visualizer
Matlab code to visualise brain graphs from connectivity matrices
This very configurable script allows you to plot a 3D (MNI space) visualisation of a brain graph, with edges represented by cylinders and vertices represented by spheres. To aid orientation, a cortical mesh can be added, as can convex hull outlines. The colouring and sizing scheme is fully configurable for both edges and vertices. You can see some example output in... -
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Syntax2DNew
Syntax2D (latest ver. 1.3.7.0)
Syntax2D is a suite of tools for urban and architectural spatial analysis developed at the University of Michigan. It includes space syntax measures of isovists, axial maps, and visibility graphs, with some newer features such as path-based measures. New versions are released here. -
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BasisViewer
Browse and visualize your downloaded Basis Band B1 biometric data
This application allows you to graph your Basis data in several ways and allows you to easily move across dates, plot mulitple attributes simultaneously, and understand trends and answer questions. This application assumes you've already run the BasisRetriever application and downloaded your metrics in csv format.
